PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026400257.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 478aa MW: 54191.9 Da PI: 6.8383

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026400257.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	115.1	7.3e-36	56	198	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kv++++ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_026400257.1 56 LPAGVKFDPTDQELI-EHLEAKVQAQNskshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSKHFFHRPSKAYTTGTRKRRKIQtecdlqgg 148 799**********.99**9996665443333333666646******.555666799**************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_026400257.1 149 ETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 198 778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MNKNQIVLHA VTVDGSSSFS SSDLIDAKLE EHQLCGTQQC PGCGHKLERK PDWLGLPAGV 60 KFDPTDQELI EHLEAKVQAQ NSKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSKH 120 FFHRPSKAYT TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF 180 GKHRKPEKTN WVMHQYHLGQ LEEEKEGELV VSKIFYQTQP RQCNWTDRAS ASIGEGSTEP 240 SSRRESGSGS CSSSKDIGNN QRDDQLSGGG NTTGISSYSA IDIQQLKSDH FSFVPFRKSF 300 DEVGLMEEVS MARDQASSRQ TLDEHEEISD HQIRQQQHHL AHEVQQQQQQ LQHRQLQVAT 360 SAFHVSRPTH PISTIISPPN LHHTSINVLD EESYHVNRIL LQNDKFQQQQ QQQQQQQQHH 420 HKLGRSSGSG LEEMLIRCTN SSSSDIKEQE SSIPNPQDAE WLKYSFSWAD PDNQDHHG

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MNKNQIVLHA VTVDGSSSFS SSDLIDAKLE EHQLCGTQQC PGCGHKLERK PDWLGLPAGV  60
KFDPTDQELI EHLEAKVQAQ NSKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSKH  120
FFHRPSKAYT TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF  180
GKHRKPEKTN WVMHQYHLGQ LEEEKEGELV VSKIFYQTQP RQCNWTDRAS ASIGEGSTEP  240
SSRRESGSGS CSSSKDIGNN QRDDQLSGGG NTTGISSYSA IDIQQLKSDH FSFVPFRKSF  300
DEVGLMEEVS MARDQASSRQ TLDEHEEISD HQIRQQQHHL AHEVQQQQQQ LQHRQLQVAT  360
SAFHVSRPTH PISTIISPPN LHHTSINVLD EESYHVNRIL LQNDKFQQQQ QQQQQQQQHH  420
HKLGRSSGSG LEEMLIRCTN SSSSDIKEQE SSIPNPQDAE WLKYSFSWAD PDNQDHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-126	NAC family protein