PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026400038.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 233aa MW: 25604 Da PI: 8.3166 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 38 | 2.1e-12 | 10 | 58 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri + +r vtfskRr+gi KA L C +++ +i+fs+ gk y++s+ XP_026400038.1 10 RIVDPNKRMVTFSKRRTGIVNKATQLLKFC-TDIVLIVFSPAGKPYTFSN 58 7888999***********************.79***************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MGRRKIDIER IVDPNKRMVT FSKRRTGIVN KATQLLKFCT DIVLIVFSPA GKPYTFSNSS 60 LGVCDIVHRF IADQTKDNKK IKNSSCVQQC RKKNVVVGSD RDSFWWDNID MEKLDSVEKL 120 MSVRKSLAVL KQNLTARKEK LASSALSAEA AASSSPSSTI QDSIVEYTAA EEAATTFAPT 180 TTNKHNAGWK GRDELGLSFE SQFDGKATML KLEDEAGGSD EEVEGGPSTD LAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34440.1 | 5e-17 | M-type_MADS family protein |