PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026399732.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 365aa MW: 40920 Da PI: 4.7864

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026399732.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.1	3.8e-35	36	127	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye++ed+ +++++sws + nsf+v+d++++a+++Lp+yFkh nf+SFvRQLn+YgFkkv+ ++ weF+++ F g+k+ll++ XP_026399732.1 36 FLTKTYEMVEDPGTDSIVSWSVTRNSFIVWDSHKLASSLLPRYFKHGNFSSFVRQLNTYGFKKVDPDR---------WEFANEGFLGGQKHLLKH 121 9******************999*************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ XP_026399732.1 122 IKRRRN 127 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MVSSTSSATS SSPSSSSSAL SPLPMEGLHD IGPPPFLTKT YEMVEDPGTD SIVSWSVTRN 60 SFIVWDSHKL ASSLLPRYFK HGNFSSFVRQ LNTYGFKKVD PDRWEFANEG FLGGQKHLLK 120 HIKRRRNLTQ NIHQGGPGVC VELGQYGLED EIDRLKRDRS VLMSEVVRLR QQQQNSEGEI 180 LVIEKRLQVI ENKQRNLMGF LGKALKNSDF VHQLISRNGQ NKALGHGIGT GRKRRLLAST 240 SAEVLQLEGI LEDIQVEDYM DHAVKEEAVI ESDVETLYAA AANTDINNLI QESDSVLGSF 300 DDLMWKKSLV EDMVSGYKEA EMKLGDQFDY LGDVQLEDLV ADPSEWVDEL AQELVDQMEF 360 PGSKP

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MVSSTSSATS SSPSSSSSAL SPLPMEGLHD IGPPPFLTKT YEMVEDPGTD SIVSWSVTRN  60
SFIVWDSHKL ASSLLPRYFK HGNFSSFVRQ LNTYGFKKVD PDRWEFANEG FLGGQKHLLK  120
HIKRRRNLTQ NIHQGGPGVC VELGQYGLED EIDRLKRDRS VLMSEVVRLR QQQQNSEGEI  180
LVIEKRLQVI ENKQRNLMGF LGKALKNSDF VHQLISRNGQ NKALGHGIGT GRKRRLLAST  240
SAEVLQLEGI LEDIQVEDYM DHAVKEEAVI ESDVETLYAA AANTDINNLI QESDSVLGSF  300
DDLMWKKSLV EDMVSGYKEA EMKLGDQFDY LGDVQLEDLV ADPSEWVDEL AQELVDQMEF  360
PGSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	119	125	LKHIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-115	HSF family protein