PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026399403.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 386aa MW: 43905 Da PI: 9.6374

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026399403.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.6	1.5e-50	72	199	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 l+pGfrFhPtdeel+v+yL+ kv++ ++++ v++evd+yk++PwdLpkk++ +e+ew+fF++r++ky++g r+nr+++sgyWkatg+dk++l++ XP_026399403.1 72 LAPGFRFHPTDEELIVHYLRSKVTSLPIQA-CVVAEVDLYKFNPWDLPKKATYGENEWFFFTPRERKYPKGARPNRKAASGYWKATGTDKPILTS 165 579***********************99.78***********9988999**********************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g+kk Lvfykg+ + +kt+W+mheyrl XP_026399403.1 166 cGSHAIGVKKALVFYKGHPANDTKTNWIMHEYRL 199 88899*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MTISSKINAN KRKSTQIRYH ARYLLFLNKN NKHADILAWL TNILSLISSF QIRFCHILHY 60 ITQPNSSNIY QLAPGFRFHP TDEELIVHYL RSKVTSLPIQ ACVVAEVDLY KFNPWDLPKK 120 ATYGENEWFF FTPRERKYPK GARPNRKAAS GYWKATGTDK PILTSCGSHA IGVKKALVFY 180 KGHPANDTKT NWIMHEYRLL GNMFQPSRER GSMTLDDWVL CRVREKDDTQ RKMWQGQSSY 240 KAEPLGLIPQ VAEPCPKIIN PSPDTVTEYL NNGCSLLAYI LAAHEVPRVE NRSTLNCGDG 300 NVNKNNSTGI LSGGSLQGGN VNNYSITSIQ KDMTVLQTTV VADSCISNLI NPLKRKPNEE 360 HADYEYPGQS NRKLNTFNPN MFTYGY

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MTISSKINAN KRKSTQIRYH ARYLLFLNKN NKHADILAWL TNILSLISSF QIRFCHILHY  60
ITQPNSSNIY QLAPGFRFHP TDEELIVHYL RSKVTSLPIQ ACVVAEVDLY KFNPWDLPKK  120
ATYGENEWFF FTPRERKYPK GARPNRKAAS GYWKATGTDK PILTSCGSHA IGVKKALVFY  180
KGHPANDTKT NWIMHEYRLL GNMFQPSRER GSMTLDDWVL CRVREKDDTQ RKMWQGQSSY  240
KAEPLGLIPQ VAEPCPKIIN PSPDTVTEYL NNGCSLLAYI LAAHEVPRVE NRSTLNCGDG  300
NVNKNNSTGI LSGGSLQGGN VNNYSITSIQ KDMTVLQTTV VADSCISNLI NPLKRKPNEE  360
HADYEYPGQS NRKLNTFNPN MFTYGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	4e-74	NAC family protein