PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026399109.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 293aa    MW: 33476.7 Da    PI: 7.0998
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026399109.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1613.6e-1970155187
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 
                     +fYn+YA + GFsvrksk +    +g++ +r +vCs egkr +++++    +++raetr gC ak+k+++ +  gk++v++++  H+H
  XP_026399109.1  70 NFYNNYAFNYGFSVRKSKAHLY-SDGKVRDRILVCSVEGKRGTDRRD-ACIKTHRAETRFGCLAKMKISNYSnGGKYRVIEFVPGHTH 155
                     6***************998876.7899****************9999.9999******************9989************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MQLQDTNEKS NSTQDGLGKH GRPDFGKGID LNISLNVDCN DNVQLIHSRM PEDIIPLLGM  60
EFETEEEAYN FYNNYAFNYG FSVRKSKAHL YSDGKVRDRI LVCSVEGKRG TDRRDACIKT  120
HRAETRFGCL AKMKISNYSN GGKYRVIEFV PGHTHVTSGP SMTHLFRSHR KITTASIAQA  180
EMADMSGINP KETLEFLSRQ AGGHQNLGFT HVDYKNYLRS KRTREMQSGD TGGVLEYLQK  240
MQLNDPNFYH AIQVDIDDLI INIFWADAKM MVDYDYFGDV MCFDTTYRKN KEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-39FAR1 family protein