PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026398919.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 394aa MW: 44644.9 Da PI: 9.184

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026398919.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.6	1.6e-55	10	139	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdee++++yL++k+++ k+ + ++i +d++k+ePwdLpkk+k +ekewyfF++rd+ky+tg r+nrat++gyWkatgkdke+++k XP_026398919.1 10 LPPGFRFHPTDEEIINCYLTEKIKNGKFIA-KAIGVADLNKSEPWDLPKKAKMGEKEWYFFCQRDRKYPTGMRTNRATQAGYWKATGKDKEIYDK 103 79***********************888.88***********99999*************************************8 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrle 129 +g lvg+kktLvfy+grapkgekt+Wvmheyrle XP_026398919.1 104 gkGGCLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLE 139 766777**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MNNGDECRDL PPGFRFHPTD EEIINCYLTE KIKNGKFIAK AIGVADLNKS EPWDLPKKAK 60 MGEKEWYFFC QRDRKYPTGM RTNRATQAGY WKATGKDKEI YDKGKGGCLV GMKKTLVFYR 120 GRAPKGEKTN WVMHEYRLEG KNSYHHFSKT SKVDEWVVCR IFHKSTGIKR SSVPSLLRMS 180 SFSDYLLDST ASSLPSLLDH GHYLSGTSKP RSNLVQNGTG KFNETPTAGS RSGHHHLFNS 240 GTTIDEHQKH PTPILSSNTP QQSSYYPIQQ NPYLNQFSPF NRGYFNQEKN NFSLVPNYPS 300 SNLSGHDQAL LRALVANNDL YRLKSNQCKV ERFSSNQSVV SLSQDTGLST DRKTEISSVV 360 SKNDMPSNTR SNEDMEEEPS SDCPVAGLDC LWNY

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MNNGDECRDL PPGFRFHPTD EEIINCYLTE KIKNGKFIAK AIGVADLNKS EPWDLPKKAK  60
MGEKEWYFFC QRDRKYPTGM RTNRATQAGY WKATGKDKEI YDKGKGGCLV GMKKTLVFYR  120
GRAPKGEKTN WVMHEYRLEG KNSYHHFSKT SKVDEWVVCR IFHKSTGIKR SSVPSLLRMS  180
SFSDYLLDST ASSLPSLLDH GHYLSGTSKP RSNLVQNGTG KFNETPTAGS RSGHHHLFNS  240
GTTIDEHQKH PTPILSSNTP QQSSYYPIQQ NPYLNQFSPF NRGYFNQEKN NFSLVPNYPS  300
SNLSGHDQAL LRALVANNDL YRLKSNQCKV ERFSSNQSVV SLSQDTGLST DRKTEISSVV  360
SKNDMPSNTR SNEDMEEEPS SDCPVAGLDC LWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.1	1e-99	NAC family protein