PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026398434.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GRF

Protein Properties

Length: 317aa MW: 36328.3 Da PI: 9.4051

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026398434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.1	7.4e-24	81	125	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC ++++ ++k+CE+H+hrgr+rsrk++ee XP_026398434.1 81 DPEPGRCRRTDGKKWRCAKEAYHDSKYCEKHMHRGRNRSRKPVEE 125 79****************************************986 PP
2	QLQ	49.9	9.7e-18	11	44	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT+ Q+ +L++Q+l++K+++++ P+P+eLl+++ XP_026398434.1 11 PFTPLQWKELETQALIFKHMVSGIPIPAELLFPL 44 9******************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MSMNGGRNKP PFTPLQWKEL ETQALIFKHM VSGIPIPAEL LFPLKFHSSS SSSLLSSKLF 60 LPSDPQIPWT YYHMGLGRKI DPEPGRCRRT DGKKWRCAKE AYHDSKYCEK HMHRGRNRSR 120 KPVEEILTST SNQSKSMISS NFSPYYNSPS PSTSSSSSSR YGFPYPQSNS TPHFAKDSTE 180 SPSYNRSENG GGRDERSFFS EKPDLSLSNS NSWNYTPLRM NSTSPVSPAL QNGFSQFDHI 240 NHNNHHQEQE QQQQKKHCFV LGTDFFEPVK TEKHREQDQQ PGHQFLHFID EYPLRNRELP 300 SSTASTQLSI SIPHPFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-41	GRF family protein