PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026398380.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 463aa MW: 50951.2 Da PI: 6.0983

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026398380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.2	6.1e-08	386	426	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L XP_026398380.1 386 ARQRRERISERIRVLQKLVPGG-----SKMDTASMLDEAANYLKFL 426 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MDSLGWDIHM FGRMSPNVHP SLWSNNDIHR HEVGETFAAS EYYTNTGGKM ADLAEDFLAL 60 SPIFQGVKTC NTNRSNWNNI NVVSHSNQIQ KEDAKRLEPA DTGLAESGES LVSQLFTSTS 120 SRMINKPNVM NPLTSLMEDY GSLSAHDHRL QVGNGGGCGS AKHGAGFSTV ESVESLDCLL 180 STTTNSNTSA SVEDDGISLI FPADCNNNLW NHVSSGESES SNGSKEYNNR DQAVSQASSI 240 PCTATTNNNA VKPSLDTRPN SSKCSTKEQQ QQQPQQQVSM NNNSHSFELV HSDSATTQGG 300 FRLITDNQPK TKKPRSEKTS NINFQNQPED ASLTSFDEPD MEAIAYMKEM IYRAAAFRPV 360 NLGLELVDKP KRKNVKISSD PQTVAARQRR ERISERIRVL QKLVPGGSKM DTASMLDEAA 420 NYLKFLRDQV KALETLGGGN NNSSPLQDNQ NFPMQNFFPF AKH

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MDSLGWDIHM FGRMSPNVHP SLWSNNDIHR HEVGETFAAS EYYTNTGGKM ADLAEDFLAL  60
SPIFQGVKTC NTNRSNWNNI NVVSHSNQIQ KEDAKRLEPA DTGLAESGES LVSQLFTSTS  120
SRMINKPNVM NPLTSLMEDY GSLSAHDHRL QVGNGGGCGS AKHGAGFSTV ESVESLDCLL  180
STTTNSNTSA SVEDDGISLI FPADCNNNLW NHVSSGESES SNGSKEYNNR DQAVSQASSI  240
PCTATTNNNA VKPSLDTRPN SSKCSTKEQQ QQQPQQQVSM NNNSHSFELV HSDSATTQGG  300
FRLITDNQPK TKKPRSEKTS NINFQNQPED ASLTSFDEPD MEAIAYMKEM IYRAAAFRPV  360
NLGLELVDKP KRKNVKISSD PQTVAARQRR ERISERIRVL QKLVPGGSKM DTASMLDEAA  420
NYLKFLRDQV KALETLGGGN NNSSPLQDNQ NFPMQNFFPF AKH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	387	392	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	3e-58	bHLH family protein