PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026398275.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 402aa MW: 45394.1 Da PI: 5.0804

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026398275.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	51	4.7e-16	7	157	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..............kvkaeek...ewyfFskrdkkyatgkrknratk 79 p G+rF+Ptde l+ +yL +kvegk+l+ e+++++ ++y e d++ +e+ +yfF+k kk ++g+r +r++ XP_026398275.1 7 PTGYRFKPTDEVLIRYYLVPKVEGKPLPSEHIFETGELYGKESPDIEVtfgqgkewykqfasY---DENfddTLYFFTKLTKKWENGSRISRSAG 98 89*************************7777888**999985478888877754321...22234377***************** PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy.............kgrapkgektdWvmheyr 127 +g+W k +++++ +++ + k+ + + + +++g++ +W m ey+ XP_026398275.1 99 RGTWTGD-KGEQIYK-DQSYKVRKRYFSYTdnaakskgrkrkmTTLTSDGNSVTWNMYEYS 157 **854.3457777.555666666666665555443222211122456668899999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MSKFQAPTGY RFKPTDEVLI RYYLVPKVEG KPLPSEHIFE TGELYGKESP DIEVTFGQGK 60 EWYKQFASYD ENFDDTLYFF TKLTKKWENG SRISRSAGRG TWTGDKGEQI YKDQSYKVRK 120 RYFSYTDNAA KSKGRKRKMT TLTSDGNSVT WNMYEYSILR GEQMLDHAIV KIRRIRSTNG 180 GSTSSPSSTS SKQYYANTDY HTGAGGAGLQ HFQGSSISSG NVVPASEDNY LQHKPFTSST 240 KLLDAAGFPD FSFSWFLQDA VPQPQQKIYS YGDSLYNKHL WLPSAYRHKT VVPPYGDYFY 300 NKPLSPSVYQ DKTVVPPLFT DDQKEENNLD LSADLLQAAV AADDSRAIGG DNAASDGNQE 360 CTNDTLMINS EVEAVQPEKE SGMISYEELD DDLEYILETG LF

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MSKFQAPTGY RFKPTDEVLI RYYLVPKVEG KPLPSEHIFE TGELYGKESP DIEVTFGQGK  60
EWYKQFASYD ENFDDTLYFF TKLTKKWENG SRISRSAGRG TWTGDKGEQI YKDQSYKVRK  120
RYFSYTDNAA KSKGRKRKMT TLTSDGNSVT WNMYEYSILR GEQMLDHAIV KIRRIRSTNG  180
GSTSSPSSTS SKQYYANTDY HTGAGGAGLQ HFQGSSISSG NVVPASEDNY LQHKPFTSST  240
KLLDAAGFPD FSFSWFLQDA VPQPQQKIYS YGDSLYNKHL WLPSAYRHKT VVPPYGDYFY  300
NKPLSPSVYQ DKTVVPPLFT DDQKEENNLD LSADLLQAAV AADDSRAIGG DNAASDGNQE  360
CTNDTLMINS EVEAVQPEKE SGMISYEELD DDLEYILETG LF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	119	138	RKRYFSYTDNAAKSKGRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	1e-12	NAC family protein