PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026397611.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 364aa    MW: 40501.1 Da    PI: 5.6178
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026397611.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.1e-11173216755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       Er+RR r+++++  Lr+l+P+      +K++Ka+i   Av Y+++Lq
  XP_026397611.1 173 VSERKRRGRMKEKLYSLRSLVPNI-----TKMDKASIIGDAVSYVQDLQ 216
                     57*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MDSQVCQAFH EFDNIHGFCS HFDFIKDGIF ERQQFIDHVK GEIPESQSYN NYYDGIPTDE  60
IASFDLGLVD QNQLFPLPSP PTQDYLFDLM SKNTSTSGTA GYGTIASYPS SSSIHHLPLH  120
LPAVTEEAKG DGIDQGENYD DNSSGTTTAT TTTTTTATST KSAKVVDRSK TLVSERKRRG  180
RMKEKLYSLR SLVPNITKMD KASIIGDAVS YVQDLQMQAK KLKAEVEGLE SSVNGSTRRS  240
YSFFENPTKT QRADYKNTIV CKTISQMDVF YVTEREYYVR FESNHGEGVA PSLFKALESL  300
SYIDVRNSNL SSAFDKFTLT STIHVREGAQ GINDLSNLKI LVSQALLNQG FLFTTPIASS  360
LTNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.11e-60bHLH family protein