PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397429.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GRF

Protein Properties

Length: 315aa MW: 36016 Da PI: 9.6811

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397429.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.1	7.3e-24	78	122	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC ++++ ++k+CE+H+hrgr+rsrk++ee XP_026397429.1 78 DPEPGRCRRTDGKKWRCAKEAYHDSKYCEKHMHRGRNRSRKPVEE 122 79****************************************986 PP
2	QLQ	52.5	1.5e-18	11	44	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT+ Q+q+L++Q+l++K+++++ P+P+eLl+++ XP_026397429.1 11 PFTPLQWQELETQALIFKHMVSGIPIPAELLFPL 44 9******************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MLMNGGRNKP PFTPLQWQEL ETQALIFKHM VSGIPIPAEL LFPLKFHSSS LLSSKLFLPS 60 DPQIPWTYYH MGLGRKIDPE PGRCRRTDGK KWRCAKEAYH DSKYCEKHMH RGRNRSRKPV 120 EEILTSTSST PNQSKSMISS NFSTYYNSPS PSSSSSSSSS RYGFPYPQSN STPHFAKDST 180 ESPSYNRSVN GGGRDERSFF TEKPDLSLSN SNSWNYTPLR MNSTSSVSPA SQNGFSQFDH 240 ISHNNIHHQQ EQQQQKKHCF VLGTDFFKSA KQEQDQQQQH HQFLQFIDEY PLRNRETPSS 300 TASTQLSISI PHPFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-41	GRF family protein