PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397421.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 281aa MW: 31315.1 Da PI: 6.2549

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.8	4e-08	170	217	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L+ l+P + + k + + +L + ++Y++sLq XP_026397421.1 170 SHSLAERVRREKINERLRCLQHLVPGC---Y-KTMGMSVMLDEIIKYVQSLQ 217 8*************************9...3.44777799999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MAEFTANLQC YKPTLPYLDM ESNIELMNQF SELNPNVLQN NSNLGLQSFM NSTVYSDEYS 60 FAHQEQAEFP VLNNSVDNNQ VLFQSESSSA VPIAHQSTVS NKKRKSIADT DGSSGNSSTL 120 GGLGGENEGH KRKNGVGTKG KKGKNNGKDA DILPKEVIHV RARRGQATDS HSLAERVRRE 180 KINERLRCLQ HLVPGCYKTM GMSVMLDEII KYVQSLQNQI EFLSMKLTAA STFFDFNLDM 240 ESPNIFQGTN ASDTQEMERM LLNRDEGYGG LSRTQVPTFP L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25330.1	1e-54	bHLH family protein