PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397385.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 528aa MW: 57926.4 Da PI: 6.0037

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397385.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.3e-12	317	363	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h E++RR++ N+++ L l+P++ K + a++++ A+eYIk+L XP_026397385.1 317 TKHFTTEKQRREQFNEKYKALSLLVPNP-----SKQDRATVVQDAIEYIKEL 363 5799*********************9.....7**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MFDSETHYFD PHSLPAGGLL GSNNSSNQGG GGERVSSSVI IQDSNTILSN PYNNPNLNQS 60 ADESVVAAAN TMDFELDQQE GLVHDPSSVQ TGVFDHSNNN WQHHQEMQEM QDQLQAEQFY 120 QQQLQNNLQC FNSNPFTQSS TPDLLNLLHL PRCGSAGASS SAASRLPNSS ISFNNNPLNF 180 HTSSLEIFGA SNGNNNEGIH GGENGSGGSS SILYDHPSLH LNNLPPQPPI FRDLFQSFPQ 240 TYGLNGSGAG SSLFGGGIDE REGSIYHHHH DGDGSNNGMR QFENSVLDFR RSKNININGV 300 GGSSSTGGFR RASSHGTKHF TTEKQRREQF NEKYKALSLL VPNPSKQDRA TVVQDAIEYI 360 KELRRTVDEL KILVDKKRCG SRNKKLKTED EAAAAAAATG DMESSTMKPT SNGNADRDQN 420 SFNGPVRSSW LQRKSKETEV DVRIIDDDVT IKLIQRSKMN NLLLVSRIID ELQLDLLHVS 480 GGCIGDHYSF WFNTKINEGS SVYASAIAKK LIEGVDKNYA ASKPENNY

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MFDSETHYFD PHSLPAGGLL GSNNSSNQGG GGERVSSSVI IQDSNTILSN PYNNPNLNQS  60
ADESVVAAAN TMDFELDQQE GLVHDPSSVQ TGVFDHSNNN WQHHQEMQEM QDQLQAEQFY  120
QQQLQNNLQC FNSNPFTQSS TPDLLNLLHL PRCGSAGASS SAASRLPNSS ISFNNNPLNF  180
HTSSLEIFGA SNGNNNEGIH GGENGSGGSS SILYDHPSLH LNNLPPQPPI FRDLFQSFPQ  240
TYGLNGSGAG SSLFGGGIDE REGSIYHHHH DGDGSNNGMR QFENSVLDFR RSKNININGV  300
GGSSSTGGFR RASSHGTKHF TTEKQRREQF NEKYKALSLL VPNPSKQDRA TVVQDAIEYI  360
KELRRTVDEL KILVDKKRCG SRNKKLKTED EAAAAAAATG DMESSTMKPT SNGNADRDQN  420
SFNGPVRSSW LQRKSKETEV DVRIIDDDVT IKLIQRSKMN NLLLVSRIID ELQLDLLHVS  480
GGCIGDHYSF WFNTKINEGS SVYASAIAKK LIEGVDKNYA ASKPENNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	6e-65	bHLH family protein