PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397330.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 411aa MW: 46920.7 Da PI: 6.5208

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397330.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.7	4.3e-05	160	183	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C+ Cg+ ++++ +Lk+H + H XP_026397330.1 160 YVCGVCGRKCRTNIDLKKHFKQlH 183 9******************98766 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MNSIGNNFTT DLLLLRPPFI NPKPKFMNPK FPNSITLTKP SNPRRIACCS TPNTSSSSSS 60 TASVTEVDMV KNSQGIWSAK RKRVVVLWDL DNKPPHGPPY QAAMALKKVA LKFGDIVEIS 120 AYANRHAFIH LPHWVRQERS ERRELDILER KGVSIPTDPY VCGVCGRKCR TNIDLKKHFK 180 QLHERERQKK LSRMRSLKGK KRQKFKERFV SGNHKYEEAA RSLIKPKVGY GLAAELRRAG 240 VFVKEVEDKP QAADWAVKRQ MQHSMNSGID WLFLVSDDSD FSEMLKRAQG SNLGTVVIGD 300 SHRALGPHAD FWVPWNGVEN GEIGEEELMS WKSRLEFMER SDHESFSVRG FDDDSDDEDE 360 DEGDDDYSDD DYDDVVEDRN LDQLVDELVI TKTGFHGPRI SAFSEGEDEE Y

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MNSIGNNFTT DLLLLRPPFI NPKPKFMNPK FPNSITLTKP SNPRRIACCS TPNTSSSSSS  60
TASVTEVDMV KNSQGIWSAK RKRVVVLWDL DNKPPHGPPY QAAMALKKVA LKFGDIVEIS  120
AYANRHAFIH LPHWVRQERS ERRELDILER KGVSIPTDPY VCGVCGRKCR TNIDLKKHFK  180
QLHERERQKK LSRMRSLKGK KRQKFKERFV SGNHKYEEAA RSLIKPKVGY GLAAELRRAG  240
VFVKEVEDKP QAADWAVKRQ MQHSMNSGID WLFLVSDDSD FSEMLKRAQG SNLGTVVIGD  300
SHRALGPHAD FWVPWNGVEN GEIGEEELMS WKSRLEFMER SDHESFSVRG FDDDSDDEDE  360
DEGDDDYSDD DYDDVVEDRN LDQLVDELVI TKTGFHGPRI SAFSEGEDEE Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52010.1	1e-144	C2H2 family protein