PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397298.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 598aa MW: 66331.8 Da PI: 6.3157

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397298.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.9	4.6e-17	212	261	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_026397298.1 212 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 261 78*****************......55**********************998 PP
2	AP2	44.5	3.8e-14	304	354	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k++g XP_026397298.1 304 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKYNG 354 89******.7**5553..2.26******99**********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 598 aa Download sequence
MWDLNDSPAN GRGGREEEKE KGLSNNSFIN NNDQNSSSSV VYMEETGSEE FEEAGSSVKK 60 SRPNQKRTSC SDHYRNNQDN NNNNSNNSKI FGFSMSSTQE EEEEEEEEIE DQGEEVQCST 120 DNEPSDEVAV TRQFFPVGES SSSPELDHAQ MDGGGGSLPR AHWVGVRFCQ SGTSVGGGGN 180 TGTELSSAST ISQQQPAQMN KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG 240 GFDTAHAAAR AYDRAAIKFR GTEADINFSL DDYQDDLKQM TNLTKEEFVH VLRRQSTGFP 300 RGSSKYRGVT LHKCGRWEAR MGQFLGKKYV YLGLFDTEVE AARAYDKAAI KYNGKEAVTN 360 FDPSIYESKD SSHNLDLSLG SSSSSKNSSL ESKDDYGSSA NASPLQQFEQ GDWRNGGRGF 420 RSTLPDEQPM ISSNPPSREG SNNDQRAAMK MFNNTHIQTP PISLNNNSKQ MNDHHQMQRY 480 DRPFLQSPSF RPPQYQFWSS NSPSNDGGRH MSLGSATGLS LAPAGEQQSA GSSWMRGGNT 540 TTTTNTSNMW PSGTTNQQQL FATSSAASSG FSSHHQQILK PQNWLLNNGF HHSPMKPP

Sequence ? help Back to Top

Protein Sequence Length: 598 aa Download sequence

MWDLNDSPAN GRGGREEEKE KGLSNNSFIN NNDQNSSSSV VYMEETGSEE FEEAGSSVKK  60
SRPNQKRTSC SDHYRNNQDN NNNNSNNSKI FGFSMSSTQE EEEEEEEEIE DQGEEVQCST  120
DNEPSDEVAV TRQFFPVGES SSSPELDHAQ MDGGGGSLPR AHWVGVRFCQ SGTSVGGGGN  180
TGTELSSAST ISQQQPAQMN KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG  240
GFDTAHAAAR AYDRAAIKFR GTEADINFSL DDYQDDLKQM TNLTKEEFVH VLRRQSTGFP  300
RGSSKYRGVT LHKCGRWEAR MGQFLGKKYV YLGLFDTEVE AARAYDKAAI KYNGKEAVTN  360
FDPSIYESKD SSHNLDLSLG SSSSSKNSSL ESKDDYGSSA NASPLQQFEQ GDWRNGGRGF  420
RSTLPDEQPM ISSNPPSREG SNNDQRAAMK MFNNTHIQTP PISLNNNSKQ MNDHHQMQRY  480
DRPFLQSPSF RPPQYQFWSS NSPSNDGGRH MSLGSATGLS LAPAGEQQSA GSSWMRGGNT  540
TTTTNTSNMW PSGTTNQQQL FATSSAASSG FSSHHQQILK PQNWLLNNGF HHSPMKPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-106	AP2 family protein