PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397288.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 603aa MW: 66898.4 Da PI: 6.374

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397288.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.9	4.6e-17	212	261	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_026397288.1 212 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 261 78*****************......55**********************998 PP
2	AP2	45.5	1.9e-14	304	359	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + n +++++lg f+t+ eAa+a+++a+ k++g XP_026397288.1 304 SKYRGVTLHK-CGRWEARMGQFLGkNSsLHRYVYLGLFDTEVEAARAYDKAAIKYNG 359 89******.7**888655466788******99**********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MWDLNDSPAN GRGGREEEKE KGLSNNSFIN NNDQNSSSSV VYMEETGSEE FEEAGSSVKK 60 SRPNQKRTSC SDHYRNNQDN NNNNSNNSKI FGFSMSSTQE EEEEEEEEIE DQGEEVQCST 120 DNEPSDEVAV TRQFFPVGES SSSPELDHAQ MDGGGGSLPR AHWVGVRFCQ SGTSVGGGGN 180 TGTELSSAST ISQQQPAQMN KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG 240 GFDTAHAAAR AYDRAAIKFR GTEADINFSL DDYQDDLKQM TNLTKEEFVH VLRRQSTGFP 300 RGSSKYRGVT LHKCGRWEAR MGQFLGKNSS LHRYVYLGLF DTEVEAARAY DKAAIKYNGK 360 EAVTNFDPSI YESKDSSHNL DLSLGSSSSS KNSSLESKDD YGSSANASPL QQFEQGDWRN 420 GGRGFRSTLP DEQPMISSNP PSREGSNNDQ RAAMKMFNNT HIQTPPISLN NNSKQMNDHH 480 QMQRYDRPFL QSPSFRPPQY QFWSSNSPSN DGGRHMSLGS ATGLSLAPAG EQQSAGSSWM 540 RGGNTTTTTN TSNMWPSGTT NQQQLFATSS AASSGFSSHH QQILKPQNWL LNNGFHHSPM 600 KPP

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MWDLNDSPAN GRGGREEEKE KGLSNNSFIN NNDQNSSSSV VYMEETGSEE FEEAGSSVKK  60
SRPNQKRTSC SDHYRNNQDN NNNNSNNSKI FGFSMSSTQE EEEEEEEEIE DQGEEVQCST  120
DNEPSDEVAV TRQFFPVGES SSSPELDHAQ MDGGGGSLPR AHWVGVRFCQ SGTSVGGGGN  180
TGTELSSAST ISQQQPAQMN KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG  240
GFDTAHAAAR AYDRAAIKFR GTEADINFSL DDYQDDLKQM TNLTKEEFVH VLRRQSTGFP  300
RGSSKYRGVT LHKCGRWEAR MGQFLGKNSS LHRYVYLGLF DTEVEAARAY DKAAIKYNGK  360
EAVTNFDPSI YESKDSSHNL DLSLGSSSSS KNSSLESKDD YGSSANASPL QQFEQGDWRN  420
GGRGFRSTLP DEQPMISSNP PSREGSNNDQ RAAMKMFNNT HIQTPPISLN NNSKQMNDHH  480
QMQRYDRPFL QSPSFRPPQY QFWSSNSPSN DGGRHMSLGS ATGLSLAPAG EQQSAGSSWM  540
RGGNTTTTTN TSNMWPSGTT NQQQLFATSS AASSGFSSHH QQILKPQNWL LNNGFHHSPM  600
KPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-103	AP2 family protein