PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397279.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 609aa MW: 67466 Da PI: 6.374

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397279.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.8	4.7e-17	212	261	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_026397279.1 212 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 261 78*****************......55**********************998 PP
2	AP2	45.4	2e-14	304	359	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + n +++++lg f+t+ eAa+a+++a+ k++g XP_026397279.1 304 SKYRGVTLHK-CGRWEARMGQFLGkNSsLHRYVYLGLFDTEVEAARAYDKAAIKYNG 359 89******.7**888655466788******99**********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MWDLNDSPAN GRGGREEEKE KGLSNNSFIN NNDQNSSSSV VYMEETGSEE FEEAGSSVKK 60 SRPNQKRTSC SDHYRNNQDN NNNNSNNSKI FGFSMSSTQE EEEEEEEEIE DQGEEVQCST 120 DNEPSDEVAV TRQFFPVGES SSSPELDHAQ MDGGGGSLPR AHWVGVRFCQ SGTSVGGGGN 180 TGTELSSAST ISQQQPAQMN KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG 240 GFDTAHAAAR AYDRAAIKFR GTEADINFSL DDYQDDLKQM TNLTKEEFVH VLRRQSTGFP 300 RGSSKYRGVT LHKCGRWEAR MGQFLGKNSS LHRYVYLGLF DTEVEAARAY DKAAIKYNGK 360 EAVTNFDPSI YESVLNPSGK DSSHNLDLSL GSSSSSKNSS LESKDDYGSS ANASPLQQFE 420 QGDWRNGGRG FRSTLPDEQP MISSNPPSRE GSNNDQRAAM KMFNNTHIQT PPISLNNNSK 480 QMNDHHQMQR YDRPFLQSPS FRPPQYQFWS SNSPSNDGGR HMSLGSATGL SLAPAGEQQS 540 AGSSWMRGGN TTTTTNTSNM WPSGTTNQQQ LFATSSAASS GFSSHHQQIL KPQNWLLNNG 600 FHHSPMKPP

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MWDLNDSPAN GRGGREEEKE KGLSNNSFIN NNDQNSSSSV VYMEETGSEE FEEAGSSVKK  60
SRPNQKRTSC SDHYRNNQDN NNNNSNNSKI FGFSMSSTQE EEEEEEEEIE DQGEEVQCST  120
DNEPSDEVAV TRQFFPVGES SSSPELDHAQ MDGGGGSLPR AHWVGVRFCQ SGTSVGGGGN  180
TGTELSSAST ISQQQPAQMN KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG  240
GFDTAHAAAR AYDRAAIKFR GTEADINFSL DDYQDDLKQM TNLTKEEFVH VLRRQSTGFP  300
RGSSKYRGVT LHKCGRWEAR MGQFLGKNSS LHRYVYLGLF DTEVEAARAY DKAAIKYNGK  360
EAVTNFDPSI YESVLNPSGK DSSHNLDLSL GSSSSSKNSS LESKDDYGSS ANASPLQQFE  420
QGDWRNGGRG FRSTLPDEQP MISSNPPSRE GSNNDQRAAM KMFNNTHIQT PPISLNNNSK  480
QMNDHHQMQR YDRPFLQSPS FRPPQYQFWS SNSPSNDGGR HMSLGSATGL SLAPAGEQQS  540
AGSSWMRGGN TTTTTNTSNM WPSGTTNQQQ LFATSSAASS GFSSHHQQIL KPQNWLLNNG  600
FHHSPMKPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-104	AP2 family protein