PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397066.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 745aa MW: 86295.7 Da PI: 8.7577

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397066.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.6	6.7e-21	11	95	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY++Y+k++GF v+k++++k ++g + tf+C+k gk+ +++k+ + ++++++rt+Cka+l +++ dg+w++++++l HnH++ XP_026397066.1 11 NFYKDYSKRLGFGVKKRSNRKD-DEGVLRWTTFTCTKAGKTVSRRKN---ALKPQPSSRTDCKAQLSTSLDIDGRWRINSINLVHNHTI 95 6*************999987.8899************9999...999********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 745 aa Download sequence
MTFGDREELF NFYKDYSKRL GFGVKKRSNR KDDEGVLRWT TFTCTKAGKT VSRRKNALKP 60 QPSSRTDCKA QLSTSLDIDG RWRINSINLV HNHTILSPSQ SRFISCHRYI SDSAKRRLEV 120 NDQAGIKGSK SYNSFVVEEG GHENISFLKK GALNYIQKAR NLQLGEGDAL AVQKYFTKMQ 180 SLNSDFFYGM DLDDEGRLKN MFWADPRSRE AYKEFVEVVT FDTTYLTNKY AMPFAPFVGV 240 NHHGESILFG CGLISSEDKD TFAWLFETWL TCMHGKAPEG IITYQDKAMQ NGIQIVFPNT 300 KHRWCLWHVM KKLPEKFRSY KKYEAISLDM LGVVYDSQDP EEFERDWSVF LEEYNLHENE 360 WLTTLYDERH LWVPCFVKSH FWAGMSTTQR SESINAFFKD YVTSKTTLKQ FVYQYEQATN 420 EKVEKESQYD FKSHNSMLSI VTTYEYEVQV RNLYTTSKFK EFQDELTGMM YCIFMSSQEN 480 DNLSTYGIRE DIVVGEGKKR MIFTISYKKD ECVVQCNCCL CESRGILCRH ALAVLIRNDV 540 DEFPEKYILR RWRKDVSRSH TKVKVNFNAC SATPERKRYD KMCSAFMKIA DLASTSEERC 600 THVIEWMDTM STKLNDPKNS NGLDVQVDVP VKKTRKRNNS NQSKTTAGTP KKPRKRNSRA 660 QSSNTIPKKS RERNTKVESC KHTPKKPGKR SKLNQYAQDD EVTTAQDVEV YHPIQSFPPE 720 MVEESPINES LAVSMGSNGE GISTA

Sequence ? help Back to Top

Protein Sequence Length: 745 aa Download sequence

MTFGDREELF NFYKDYSKRL GFGVKKRSNR KDDEGVLRWT TFTCTKAGKT VSRRKNALKP  60
QPSSRTDCKA QLSTSLDIDG RWRINSINLV HNHTILSPSQ SRFISCHRYI SDSAKRRLEV  120
NDQAGIKGSK SYNSFVVEEG GHENISFLKK GALNYIQKAR NLQLGEGDAL AVQKYFTKMQ  180
SLNSDFFYGM DLDDEGRLKN MFWADPRSRE AYKEFVEVVT FDTTYLTNKY AMPFAPFVGV  240
NHHGESILFG CGLISSEDKD TFAWLFETWL TCMHGKAPEG IITYQDKAMQ NGIQIVFPNT  300
KHRWCLWHVM KKLPEKFRSY KKYEAISLDM LGVVYDSQDP EEFERDWSVF LEEYNLHENE  360
WLTTLYDERH LWVPCFVKSH FWAGMSTTQR SESINAFFKD YVTSKTTLKQ FVYQYEQATN  420
EKVEKESQYD FKSHNSMLSI VTTYEYEVQV RNLYTTSKFK EFQDELTGMM YCIFMSSQEN  480
DNLSTYGIRE DIVVGEGKKR MIFTISYKKD ECVVQCNCCL CESRGILCRH ALAVLIRNDV  540
DEFPEKYILR RWRKDVSRSH TKVKVNFNAC SATPERKRYD KMCSAFMKIA DLASTSEERC  600
THVIEWMDTM STKLNDPKNS NGLDVQVDVP VKKTRKRNNS NQSKTTAGTP KKPRKRNSRA  660
QSSNTIPKKS RERNTKVESC KHTPKKPGKR SKLNQYAQDD EVTTAQDVEV YHPIQSFPPE  720
MVEESPINES LAVSMGSNGE GISTA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	651	689	KKPRKRNSRAQSSNTIPKKSRERNTKVESCKHTPKKPGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-117	FAR1 family protein