PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026396880.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 283aa    MW: 31559.4 Da    PI: 8.203
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026396880.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.6e-08181221954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_026396880.1 181 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYMKFL 221
                     699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MDVDFLKSAT EEQTMEMMMM MMQMEKLPTD YPGPHHQHEG TDSQSMEFSG SSIDSLTHHS  60
YDDNPHQSSS LALVNHHHHH ANPSTLSFIG NNSSVHHQEQ VNMSSAMVAG NNKYSSGHHA  120
GELSGANANG AFSNKRSSMA AMREMIFRIA AMQPIHIDPE SVKPPKRKNV KISKDPQSVA  180
ARHRRERISE RIRILQRLVP GGTKMDTASM LDEAIHYMKF LKTQVQSLEK VATNNINTST  240
GTTGSPPLGF GANYSSLAKA YQYLPTQHQI MFNPNNTHHQ MLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.14e-42bHLH family protein