PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026396112.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 676aa    MW: 78074 Da    PI: 7.779
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026396112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.92.5e-2137140290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 
                     fY+eY+++ GFs+rk++s+ s + g i +  fvC +eg   ++++                +k+++++++ rt+Cka++++ ++  ++ w+++ +
  XP_026396112.1  37 FYKEYGRSKGFSTRKRSSYASAHMGGISRVIFVCGCEGVYGKDSNYddsnifdddeveqeIVKRKKNTSTMRTNCKAMMRIALDVkRNIWYINAF 131
                     9*************************************99998888899********9988888999999*************9989******** PP

            FAR1  82 eleHnHela 90 
                     + eHnH ++
  XP_026396112.1 132 VDEHNHVMV 140
                     ******886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 676 aa     Download sequence    
METTIENNEI GCNNMSSKDL KPAVGLEFSS IETADLFYKE YGRSKGFSTR KRSSYASAHM  60
GGISRVIFVC GCEGVYGKDS NYDDSNIFDD DEVEQEIVKR KKNTSTMRTN CKAMMRIALD  120
VKRNIWYINA FVDEHNHVMV SPKKRVLMRS NKYMPSEAKS LVEAFNNNSL PVGKVASLFG  180
HSENTTFTPR DVYNHLRTVR KSLLDIGDAE ALHDYFRKRI IENPSIYYAI QVDEIGRAAN  240
FFWVDAHSRM AYSRFGDVVT FDTTYRTKKY SMPFAPFTGT NHHHQSITFG FALIGDETKE  300
TFTWLFKTWL EAMGGTPPIS VLTDQDQAMT IAIATVLPNT RHRFCLWHIK KKFGEKLSHV  360
FFKKSKFKRT VKAVTRFTYT IEDFENQWNS MLIEFNLIEH EWIKDLTSLR EFVESCDQAL  420
ERMYVREREE DYKSIHMKRI FASQDLLVMH ASKVFTRVIF NKVHAEFNAS LKYQSTIIEV  480
NGYEHSYKVF WKVDKDIVEE FSLKINELTK SGPCGCQNFE FKGIPCRHLH HILVSRLYET  540
EIPPHFIMER WTKNANKCAV LGSDRLEIKD DKVGIEAMQI SHYCRRSSEL AYMFLGKSEK  600
AYEMAIDFLN QAFEKAREID NVELEKEHGE DITIDQACTT AVDVPGDVSN VTTAAKMILG  660
DPRISQTKGR NPEKGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-104FAR1 family protein