PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026395969.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 566aa MW: 63661.9 Da PI: 8.0884

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026395969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.5	7.3e-06	461	503	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + r RR++i ++ ++L +l+P K++ ae+ A +YIk L XP_026395969.1 461 VAARERRRKISEKTQQLGKLIPGG-----SKMNTAEMFHAAYKYIKFL 503 56799***************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MNLKKQLHSL TKGNKTLKSY LTNVKALFAQ LAESGYTVSA DEKKQAICNG LNQSYDPIVT 60 ALTTVEGMDI GTFYSHLLTF GMRLEQHLAL LQPSLANVAM TSTAASGNMQ DQRRFIGQGS 120 QYQQNRNRSF RRGNNNSFQR NNQQQPRNET GPKCQICKKI NHLADRCWFR YEKPNNNQQR 180 QLVAYIALPE GQLDNQWVTD TGATHHLTAD MRNLTIPHEY DGTEQVQVVM QKIVKMNNNS 240 SSNNLMMSAN SSPLMNTSFM SNTSSNSSCI TGITTDNIMF FEQEEEDYFY SSTTTSTTTD 300 ANLLPYFSYS STNDYYGDEP TMFSTHSSVA PNDGFMNSGF EDYEFNNTTA PASTYHYPKR 360 QRISNQHLSS TTTTTTTFHA ENSISFVNNG AMYYPNSSSN FNYPSCSHYD HQFPKQSFLL 420 PSVTPSTTSN AGQNYSCGDY NGMSSTNAKK SKSGYLSSQS VAARERRRKI SEKTQQLGKL 480 IPGGSKMNTA EMFHAAYKYI KFLRAQIGVL EFMGSIQENN KMDCLSPVLE VLLRSIKVQE 540 KLYLEEMCLV SKELFDTCAA QTYISS

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MNLKKQLHSL TKGNKTLKSY LTNVKALFAQ LAESGYTVSA DEKKQAICNG LNQSYDPIVT  60
ALTTVEGMDI GTFYSHLLTF GMRLEQHLAL LQPSLANVAM TSTAASGNMQ DQRRFIGQGS  120
QYQQNRNRSF RRGNNNSFQR NNQQQPRNET GPKCQICKKI NHLADRCWFR YEKPNNNQQR  180
QLVAYIALPE GQLDNQWVTD TGATHHLTAD MRNLTIPHEY DGTEQVQVVM QKIVKMNNNS  240
SSNNLMMSAN SSPLMNTSFM SNTSSNSSCI TGITTDNIMF FEQEEEDYFY SSTTTSTTTD  300
ANLLPYFSYS STNDYYGDEP TMFSTHSSVA PNDGFMNSGF EDYEFNNTTA PASTYHYPKR  360
QRISNQHLSS TTTTTTTFHA ENSISFVNNG AMYYPNSSSN FNYPSCSHYD HQFPKQSFLL  420
PSVTPSTTSN AGQNYSCGDY NGMSSTNAKK SKSGYLSSQS VAARERRRKI SEKTQQLGKL  480
IPGGSKMNTA EMFHAAYKYI KFLRAQIGVL EFMGSIQENN KMDCLSPVLE VLLRSIKVQE  540
KLYLEEMCLV SKELFDTCAA QTYISS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30670.1	1e-23	bHLH family protein