PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026395676.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 327aa MW: 36473.8 Da PI: 6.3801 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.3 | 1.6e-09 | 42 | 91 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r++ + rE+ RRdr+N+ f eL l ++ +K++Ka+iL +++ +k+L XP_026395676.1 42 RKVQKADREKLRRDRLNEQFMELGNALDPD----RPKNDKATILGDTIQMLKDL 91 5677889********************997....79****************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 327 aa Download sequence |
MDQWKTKAFC QSGDLAVSDI HRFPPESSQR PELEVKDSIA ARKVQKADRE KLRRDRLNEQ 60 FMELGNALDP DRPKNDKATI LGDTIQMLKD LTAQVNKLKE EFTALSEESN ELTQEKNELR 120 EEKASLKSDI DNLNMQYQQR IRVMFPPWAP MDPSVVMGPH PYPYPLPVPV PAGPIPMHPS 180 MQPYPFFANQ NLGGIPNPCS TYMPFSSPPA NAQMEQVSPQ FVSPHMQPSI RSHVSSKQDS 240 KSKSSDRQRG NNVERSDGSN DVVTELELKT PGSTADQEAS CAEKKRKQSK LKDSEAGKEE 300 SCSSRCSSRG LQDSSSNSVG DAPKADK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G19860.2 | 1e-71 | bHLH family protein |