PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026395435.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | ARF | ||||||||
Protein Properties | Length: 920aa MW: 102251 Da PI: 6.0243 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 77.8 | 1.1e-24 | 129 | 230 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F +++ XP_026395435.1 129 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 219 99*****************************8544444..48************************************************..889 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 + +l+++++r+ XP_026395435.1 220 KNQLLLGIRRA 230 9999****997 PP | |||||||
2 | Auxin_resp | 118 | 7.7e-39 | 255 | 338 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+++YnPras++eFv+++ k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldp+rWpnS+Wrs+k XP_026395435.1 255 AAHAAATNSRFTIFYNPRASPTEFVIPLTKYAKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPTRWPNSHWRSVK 338 79*********************************9789******************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 920 aa Download sequence |
MRMSSSGFGQ QQTQEGGEKR CLNSELWHAC AGPLVSLPAL GSRVVYFPQG HSEQVAASTN 60 KEIESHIPNY PSLPPQLICQ LHNVTMHADV ETDEVYAQMT LQPLSTQEQK DSFLPVELGC 120 PSKQPTNYFC KTLTASDTST HGGFSVPRRA AEKVFPPLDF SQQPPAQELI ARDLHGNEWK 180 FRHIFRGQPK RHLLTTGWSV FVSAKRLVAG DSVLFIWNEK NQLLLGIRRA SRPQTVMPSS 240 VLSSDSMHIG LLAAAAHAAA TNSRFTIFYN PRASPTEFVI PLTKYAKAVY HTRVSVGMRF 300 RMLFETEESS VRRYMGTITG ISDLDPTRWP NSHWRSVKVG WDESTAGERQ PRVSLWEIEP 360 LTTFPMYPSS FPLRLKRPWP AGLPNPLGGR DDDVGLNSPL MWYRGDTGDK GMESLNFQGI 420 GVTPWIQPRL DASLLGLQPD MYQAMAAAAL QEMRTMDPSK QVAESLMQFS QSQNVPGSAL 480 MQRQMLQPSQ PQHSFVQGIQ ENQFHTQAQM QALLQQQLLQ SRSFNDQQQQ QLQQQQQQQQ 540 QQQQQQQQQQ LQQPQQQQQQ QYPSPQQQIP NVVSSLSHLV SSPQSQASMQ NIRSVSQQPN 600 YSGFPATSSL SPLHSLLGSF SQTEASQLLN MPISNPLPPS AATWLPRQAS ADSLVRSGAA 660 TQCDLPQVDQ LGTQQGNALH HTLSLPPFSD RDSSVDQEGS TDPQNNLLFG VNIDSSSLLA 720 HNGMSSLRGV GSECESTNVL FASANFPNTT NTDYPLNPDM TPSSCIDESD FLPSPENGDQ 780 GNPPRTFVKV HKSGSFGRSL DITRFSSYYE LRSELASMFS LEGQLEDPLR SGWQLVFVDR 840 ENDVLLLGDD PWQEFVDSVW CIKILSPQEV HQLGRQGLEV LNLAQNSVQK LTSGNCDDHV 900 SRQDPRITGS GITAVGSLDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30330.1 | 0.0 | ARF family protein |