PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026395237.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | ARR-B | ||||||||
Protein Properties | Length: 504aa MW: 56567.2 Da PI: 6.9673 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 64.9 | 1.5e-20 | 180 | 233 | 1 | 55 |
G2-like 1 kprlrWt.peLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ W+ peLH++Fvea +LG +kA+P++il m+v+gLt+e+v+SHLQkYR XP_026395237.1 180 KTRISWAdPELHAKFVEAFYKLG--DKAVPSKILVEMNVQGLTREKVASHLQKYRK 233 6899**758*************4..89****************************5 PP | |||||||
2 | Myb_DNA-binding | 28.5 | 3.6e-09 | 188 | 232 | 6 | 48 |
HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 +e++ ++v+a+ +lG + +++I +m+ +g+t++ + s++qky+ XP_026395237.1 188 PELHAKFVEAFYKLGDKaVPSKILVEMNvQGLTREKVASHLQKYR 232 8**************99***************************7 PP | |||||||
3 | Response_reg | 76 | 1.4e-25 | 14 | 122 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+ l ++ll+++l+k +y ev+++ ++ +a ll++++ +D++++D++m +m+G+ellk+i e ++p+i+++++g+ e++ + ++ G XP_026395237.1 14 VLAVDDSSLCLKLLESLLKKCRY-EVTATLSANAAFGLLRKNKknFDIVITDVQMDEMNGFELLKTIGLEM-DIPVIMMSTSGDYETVMKGIEHG 106 799********************.***************777778**********************6654.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l+Kp + +e+ + XP_026395237.1 107 ACDYLVKPPSLKEIQN 122 ********98888765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 504 aa Download sequence |
MEFMNDKFPE GLRVLAVDDS SLCLKLLESL LKKCRYEVTA TLSANAAFGL LRKNKKNFDI 60 VITDVQMDEM NGFELLKTIG LEMDIPVIMM STSGDYETVM KGIEHGACDY LVKPPSLKEI 120 QNIWQHVVRL KKNKSTLSAP DTEKKGTERN LRRKNNNQTK NNEDEDSSHS SDELLPNQKK 180 TRISWADPEL HAKFVEAFYK LGDKAVPSKI LVEMNVQGLT REKVASHLQK YRKILEKQSK 240 KPNSITTFNG MSGRLRNSTF PSLLNLQFQN GRNYLSSSQS YHRGTSQLSH YGVTPNASNR 300 SSVNPHPHFL PSTQPYTSQY SSTLGTINQN PQKIQVSDST MHNLHNQTYA SGLNAQTFSS 360 SSKLFDPHMV SSSKFPDYNA NIHSGTSNFQ FGEASNVLAN NNLFDDLTYY PMLDHASSSN 420 LNTVFQSDYT FNMTHSTLSG YDDGMRNMIA PTIPSTNVME SQSVDQIPSL ENPLAFLETD 480 SDHLGSYSSA DDDLSAAIRP YQQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-57 | ARR-B family protein |