PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026395057.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C3H | ||||||||
Protein Properties | Length: 503aa MW: 54507.1 Da PI: 8.1231 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 31.9 | 2.3e-10 | 90 | 114 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 ++ C +++ t tC++Gd+CkF H+ XP_026395057.1 90 GETDCAHYMLTRTCRFGDTCKFDHP 114 6789********************8 PP | |||||||
2 | zf-CCCH | 25.9 | 1.7e-08 | 141 | 167 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 ++++ C++f++t C++G +CkF+H++ XP_026395057.1 141 PGEPACPYFLKTKKCRFGFKCKFNHPK 167 57899********************96 PP | |||||||
3 | zf-CCCH | 40.7 | 3.9e-13 | 187 | 210 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 ++C+f+++tG+Ck+G++CkF+H++ XP_026395057.1 187 PPCSFYMKTGICKFGESCKFHHPK 210 89********************96 PP | |||||||
4 | zf-CCCH | 38.4 | 2e-12 | 261 | 287 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 ++++ C+f+++tG CkyG++C+++H++ XP_026395057.1 261 PGEVDCPFYLKTGSCKYGATCRYSHPE 287 57899********************96 PP | |||||||
5 | zf-CCCH | 37.9 | 3e-12 | 347 | 371 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 ++ +C f+++tG Ck+G+rCk++H+ XP_026395057.1 347 GQTECEFYMKTGDCKFGERCKYHHP 371 6789********************8 PP | |||||||
6 | zf-CCCH | 41.4 | 2.3e-13 | 400 | 423 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 + C+f+++tG CkyG++C+F H+p XP_026395057.1 400 VVCPFYMKTGACKYGSSCRFDHPP 423 67********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 503 aa Download sequence |
MHMMNHHDRY RFPSISQQSL WPPGVDASSS FSPCFAGTKR TSSEALYHQT YLGTSNTFGQ 60 SEAFYSANNL SKRPRFESTS HLPIYPQRPG ETDCAHYMLT RTCRFGDTCK FDHPIWVPEG 120 GIPDWKEVPL VPLGDTLPER PGEPACPYFL KTKKCRFGFK CKFNHPKDIT KSVIVDLSLL 180 PERPYAPPCS FYMKTGICKF GESCKFHHPK DIQIPVTGQE NGCAEHDASV GSFDSIMSVK 240 PPFVPFTPAS LHNTKGLPVR PGEVDCPFYL KTGSCKYGAT CRYSHPERAV ISISVAPGLG 300 HAMMTSSASS MNVGLINPAA MVLPTIDPRL GQATLGLGVA VYPQRPGQTE CEFYMKTGDC 360 KFGERCKYHH PIDRTAATQS MPKQDVKLTL AGLPRREGAV VCPFYMKTGA CKYGSSCRFD 420 HPPPGEAVAM ATVVQGSSSA PLSGKAVAMA TTVQGSSSAP PLGEAVAMPT VTQGSSFAAE 480 DGESNNNNNT IVPEVAISFG STS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12680.1 | 0.0 | C3H family protein |