PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026394979.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C3H | ||||||||
Protein Properties | Length: 741aa MW: 81918.6 Da PI: 5.1065 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 24.3 | 5.4e-08 | 97 | 124 | 2 | 26 |
-S---SGGGGTS...--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartG...tCkyGdrCkFaHg 26 kt +C+ a+tG C yG++C+F+H+ XP_026394979.1 97 KTGICPKVAKTGcvsSCTYGAKCRFSHD 124 899************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 741 aa Download sequence |
MDGASTIEEV EAVETPIVIS NPVVNVVLTP EELIAKSIAP VKKEFLCPPQ HTRPCPNVKD 60 GDGVSSETNK SDGYHSKYSK NTKSKRQLKR ERQEEKKTGI CPKVAKTGCV SSCTYGAKCR 120 FSHDVEVYKA QKPVDLEGNC PFLSLEGPCP YGLACRYSGT HKDENAMEIV GMGNERYETN 180 ELKKDVQKLL WKNVMTFPKA DAQLKALGIF DNYKLKKGEV KGEGGEVEKV EVEGEVDMVE 240 ADQGIVNGSS TAFENDAGEN GASTNKTECT EEVEADQDIV NGSSTAFEND AGENGASINK 300 TECTEKVKLE EGNVEIALST DDPRPIKMAK HSSEESCPGD MDNGTGSLEN DLVMRTEVEA 360 SQTDDISSEA DACLKLHPRE KKLIDFSGKL YLAPLTTVGN LPFRRVCKNL GADITCGEMA 420 MCTNLLQGQA SEWALLRRHS SEDLFGVQIC GSFPDTIART VELIDRECTV DFIDINMGCP 480 IDLVVNKGAG SCLLTKPVRM KGIIKAASAT VDTPITMKVR TAYFEGKNRI DSLISDIGSW 540 GATALTIHGR SRQQRYSKAA DWDYIYQCAR KAPDSLQVLG NGDVFSYVDW NKHLSDCPKI 600 SACMIARGSL VKPWLFTEIK EQRHWDISSS ERLDIYKDYV RCGLQHWGSD TKGVETTRYF 660 LLEWLSYLYR YIPVGLLDVV PSKLNWRSPS FYGRDDLETL MASESAADWI RISEMLLGKV 720 PAGFHFAPKH KSNAYDKAEN G |