PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026394961.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 352aa MW: 39774.5 Da PI: 5.1665

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026394961.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47	4.8e-15	61	150	5	96
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 ++++ ++ ++++p +f++e+g + s +l+ + g++W v+++ + +s+ ++l++G keF k+ + g f+vFk++g+s f v + XP_026394961.1 61 IVHNHLVQNEQIRIPQRFIREYGDD--LSNHAVLTVSGGKEWFVEMKRDSNSDDggVYLKNGLKEFYKSYSITPGTFLVFKYEGNSHF--EVVI 150 45778889999*********988..7889***********7744444467**************************9999..5544 PP
2	B3	40	6.9e-13	253	336	5	87
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 +++++ +++ l +p +f + ++ k e++ l + grsW v + + +++ + kG ++F ++n+LkegD++vF+++ + XP_026394961.1 253 GLQPSYVNHKYLPIPSDFEGKEELGKLETISLNVVEDYGRSWIVHIFTnGRDLQGIRFCKGVSRFLRDNNLKEGDVCVFEMVTK 336 44556666667*****8777888889999***********5533444449999*******************7643 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MNPSYGNRSS SKNSTGSTSG QRNTSTQTKN NDGGSNSSGT SYHPGTHDDT VYMGGPGFCQ 60 IVHNHLVQNE QIRIPQRFIR EYGDDLSNHA VLTVSGGKEW FVEMKRDSNS DDGGVYLKNG 120 LKEFYKSYSI TPGTFLVFKY EGNSHFEVVI FQMSGTEIDY SSFNNNNHME ETSSQTDTID 180 DKDDYYVEAS DDNDDNDESG DDSDDEECEQ IRVGLTREKN RSITARGLET HDRAIGIKRG 240 FKSSKQYPFF AIGLQPSYVN HKYLPIPSDF EGKEELGKLE TISLNVVEDY GRSWIVHIFT 300 NGRDLQGIRF CKGVSRFLRD NNLKEGDVCV FEMVTKKKSS SIEYARVHIF RS

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MNPSYGNRSS SKNSTGSTSG QRNTSTQTKN NDGGSNSSGT SYHPGTHDDT VYMGGPGFCQ  60
IVHNHLVQNE QIRIPQRFIR EYGDDLSNHA VLTVSGGKEW FVEMKRDSNS DDGGVYLKNG  120
LKEFYKSYSI TPGTFLVFKY EGNSHFEVVI FQMSGTEIDY SSFNNNNHME ETSSQTDTID  180
DKDDYYVEAS DDNDDNDESG DDSDDEECEQ IRVGLTREKN RSITARGLET HDRAIGIKRG  240
FKSSKQYPFF AIGLQPSYVN HKYLPIPSDF EGKEELGKLE TISLNVVEDY GRSWIVHIFT  300
NGRDLQGIRF CKGVSRFLRD NNLKEGDVCV FEMVTKKKSS SIEYARVHIF RS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	8e-20	B3 family protein