PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026394718.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WOX

Protein Properties

Length: 311aa MW: 35728.7 Da PI: 4.6564

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026394718.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.3	8.3e-21	129	189	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le F + + +ps+++++e++++l +++e++V++WFqNrRa+ k+ XP_026394718.1 129 RQRWTPTTVQLQILEHIFDQgTGTPSKQKIKEITNELlqhgQISETNVYNWFQNRRARSKR 189 89***************99************************************97 PP
2	Wus_type_Homeobox	100	1.7e-32	128	191	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtPt+ Q++iLe+++++G+ tP+k++i++it+eL ++G+i+++NV++WFQNr+aR+++kq XP_026394718.1 128 SRQRWTPTTVQLQILEHIFDQGTGTPSKQKIKEITNELLQHGQISETNVYNWFQNRRARSKRKQ 191 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MCERDIYDYI GMMGLVKYFR KSVEEEEEGN QKEEGEEVSE KVMELENQLN QQHQQEQEQQ 60 QNGVLYVKVM TDEQMEVLKR QISAYASITE QLVQMHKSVS TQHDLTGMKL GNFYCDPLMS 120 STGHKISSRQ RWTPTTVQLQ ILEHIFDQGT GTPSKQKIKE ITNELLQHGQ ISETNVYNWF 180 QNRRARSKRK QLVNTINTAE SEAETEDESQ MEKKAKPESV QSHENSALRL EEMCFNNSEM 240 NSDLHLLDPY SNQPEMFPSD GGSKSSGSLG RLSYYESVMS NPRLDHLMGK VEEIPGSFST 300 FPQESGYDII G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	183	191	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	1e-70	WOX family protein