PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026394688.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Nin-like

Protein Properties

Length: 964aa MW: 106448 Da PI: 6.5095

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026394688.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.3	7.2e-29	634	684	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ XP_026394688.1 634 EKTISLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 684 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 964 aa Download sequence
MDDGRFPQDT MSAALSSDPS VDFDLMEALL SGGCWLETTE GSAADFLQPS SSNFYNSSYF 60 LAPPTSTSES LNPNYRQSNN QEETDGSILP SRNSISLAPQ SDTSFTVRYP NQNTFRSSEF 120 SGQSDGYPAE GSSQLSRRWW DGPVPHSGTL ASVKDRLNSA LAYLKNSLRE GDVLIQIWVP 180 VKRGDRQFLV TEDQPFTTLD SNCQNLESYR KISMRFEFPA DENSKESVGL PGRVFLEKVP 240 EWTPNVQLFS IDEYPRIGHA QQHHVHGTVA LPIFERGSRA CLGVVEVVMT TQKINFASEL 300 DTVCRALEAV NLRGSKVESP PGPPPIVKDS RLPYHAILPE ILEVLKAVCK THRLPLAQTW 360 VPCTVQAKEG CRHSDENYAH CVSTVDNACC VADTRITGFH EACSDHHLFR GQGVAGRAFT 420 TNQPCFSNDI TTYSKKDYPL SHYAKMFQLQ AAVAIRLRSI YTGKVDYVLE FFLPVDCRDS 480 EEQKTMLSSL SIIIQQVCRT LRVVSDKELE EESSEVVLPS DEGLKREERT NLGPTTSKGS 540 SEEESSWISH MMEAQRKGKG VQKQEPTEGF KVTTHWNSSE TVFPQGQTFG DLKQHRQDSG 600 PKDTAESGGD SSFAEQRRFS SVGKTGEKRR TKMEKTISLQ VLRQYFAGSL KDAAKSIGVC 660 PTTLKRICRQ HGITRWPSRK IKKVGHSLRK LQVVIDSVQG AEGAFQIGSI YANFPDLTSP 720 NLSGTSPFST PKPNDRLNPS KIQPEGAPSP PAASKSPSSS CSQSSSSSLS SSSGKQQNSV 780 IGSLASIEDA SMAETLGGDS CTLKRARSEA GLYSAGELHT TAQEDPGLFG RSQSQKCLGT 840 EHLILDDCLP PLPSSHNRGA SRDTKGGLRM KVTYGEEKVR FSLQPYWGYR DLQQEIAKRF 900 HIEDMSRVDL KYLDDDSEWV LLTCDADLEE CMDIYKSSHT QTIKLSVHHS SHPNLGSSFG 960 SNAP

Sequence ? help Back to Top

Protein Sequence Length: 964 aa Download sequence

MDDGRFPQDT MSAALSSDPS VDFDLMEALL SGGCWLETTE GSAADFLQPS SSNFYNSSYF  60
LAPPTSTSES LNPNYRQSNN QEETDGSILP SRNSISLAPQ SDTSFTVRYP NQNTFRSSEF  120
SGQSDGYPAE GSSQLSRRWW DGPVPHSGTL ASVKDRLNSA LAYLKNSLRE GDVLIQIWVP  180
VKRGDRQFLV TEDQPFTTLD SNCQNLESYR KISMRFEFPA DENSKESVGL PGRVFLEKVP  240
EWTPNVQLFS IDEYPRIGHA QQHHVHGTVA LPIFERGSRA CLGVVEVVMT TQKINFASEL  300
DTVCRALEAV NLRGSKVESP PGPPPIVKDS RLPYHAILPE ILEVLKAVCK THRLPLAQTW  360
VPCTVQAKEG CRHSDENYAH CVSTVDNACC VADTRITGFH EACSDHHLFR GQGVAGRAFT  420
TNQPCFSNDI TTYSKKDYPL SHYAKMFQLQ AAVAIRLRSI YTGKVDYVLE FFLPVDCRDS  480
EEQKTMLSSL SIIIQQVCRT LRVVSDKELE EESSEVVLPS DEGLKREERT NLGPTTSKGS  540
SEEESSWISH MMEAQRKGKG VQKQEPTEGF KVTTHWNSSE TVFPQGQTFG DLKQHRQDSG  600
PKDTAESGGD SSFAEQRRFS SVGKTGEKRR TKMEKTISLQ VLRQYFAGSL KDAAKSIGVC  660
PTTLKRICRQ HGITRWPSRK IKKVGHSLRK LQVVIDSVQG AEGAFQIGSI YANFPDLTSP  720
NLSGTSPFST PKPNDRLNPS KIQPEGAPSP PAASKSPSSS CSQSSSSSLS SSSGKQQNSV  780
IGSLASIEDA SMAETLGGDS CTLKRARSEA GLYSAGELHT TAQEDPGLFG RSQSQKCLGT  840
EHLILDDCLP PLPSSHNRGA SRDTKGGLRM KVTYGEEKVR FSLQPYWGYR DLQQEIAKRF  900
HIEDMSRVDL KYLDDDSEWV LLTCDADLEE CMDIYKSSHT QTIKLSVHHS SHPNLGSSFG  960
SNAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein