PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026394452.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 296aa    MW: 32027.6 Da    PI: 5.6746
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026394452.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.56.5e-17189225135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cgt++  Tp++Rrgp g+++LCnaCGl+++ kg+
  XP_026394452.1 189 CTHCGTSSktTPMMRRGPAGPRSLCNACGLMWANKGT 225
                     *******99*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MNNHQSQIEE EDNNNIGEDH QTRFEAMDDV DDVPSDSGYA VVASNPTLPP LRSDAGGSDQ  60
LTLSFQGEVY VFDSVSAEKV QAVLLLLGGY EIPPGVPHVD LTAHIDKGMG DNVVRRSSLP  120
QRAASLNRFR EKRKERCFEK KIRYTVRKEV ALRMQRKKGQ FTSSKVNPEE SGSAGVNGTP  180
DDSQIEKLCT HCGTSSKTTP MMRRGPAGPR SLCNACGLMW ANKGTLRALP KGPGGALISS  240
HAINEQNVQG EANGTDIAST NETFAAPPIS AQGVNNDMQQ GVNSDMQQGV NNDMQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.23e-64GATA family protein