PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026394451.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 394aa    MW: 44060.2 Da    PI: 4.8069
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026394451.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.11.8e-16230266135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+ +  Tp +Rrgp g+++LCnaCGl++++kg+
  XP_026394451.1 230 CQHCGVDEtsTPAMRRGPAGPRSLCNACGLMWASKGT 266
                     *****99989*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
MNPKLFQSFP FEDEFENEVK SPFEIGNDDD DDDDYEEEEN EEGYEDDDES TDDDYEEENT  60
QVNSRRKVES STTTDTNNDA TVPLVSRHSE LTISFEGELY VFHSVTYQKV QAVLLLLGAR  120
HEPIAAPSVE TSFYQHNKGS GDDAQQHSNI SGRTASVVRF QKKRKELCFE KKTRYNCRKE  180
VAKRMHRKKG QFVSLRENHK EGSAAASGWD NIQSFPQNNR NPPKIARCKC QHCGVDETST  240
PAMRRGPAGP RSLCNACGLM WASKGTLRDL SKGRKNPSYD KNEQNSLAQT EVLSMESESA  300
PSHSDDQGSP ENLKPSPYKI ASPAIPDKER IPDCGMVAQS LWGDLRALSS NFWDLQGTPN  360
DLSRLSAVGV DLHSHLNEQL DANGSIIASY GQGL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1162183KKRKELCFEKKTRYNCRKEVAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.22e-58GATA family protein