PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026394450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | GATA | ||||||||
Protein Properties | Length: 418aa MW: 46752 Da PI: 4.6014 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 51 | 1.9e-16 | 230 | 266 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+ + Tp +Rrgp g+++LCnaCGl++++kg+ XP_026394450.1 230 CQHCGVDEtsTPAMRRGPAGPRSLCNACGLMWASKGT 266 *****99989*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence |
MNPKLFQSFP FEDEFENEVK SPFEIGNDDD DDDDYEEEEN EEGYEDDDES TDDDYEEENT 60 QVNSRRKVES STTTDTNNDA TVPLVSRHSE LTISFEGELY VFHSVTYQKV QAVLLLLGAR 120 HEPIAAPSVE TSFYQHNKGS GDDAQQHSNI SGRTASVVRF QKKRKELCFE KKTRYNCRKE 180 VAKRMHRKKG QFVSLRENHK EGSAAASGWD NIQSFPQNNR NPPKIARCKC QHCGVDETST 240 PAMRRGPAGP RSLCNACGLM WASKGTLRDL SKGRKNPSYD KNEQNSLAQT EVLSMESESA 300 PSHSDDQGSP ENLKPSPYKI ASPAIPDKEE TSEDCTQHFL IGSENLSVDI NEERIPDCGM 360 VAQSLWGDLR ALSSNFWDLQ GTPNDLSRLS AVGVDLHSHL NEQLDANGSI IASYGQGL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 162 | 183 | KKRKELCFEKKTRYNCRKEVAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51600.2 | 2e-58 | GATA family protein |