PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026394088.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 409aa MW: 46841.7 Da PI: 6.6554

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026394088.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.4	5.5e-05	160	183	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C+ Cg+ ++++ +L++H + H XP_026394088.1 160 YVCGVCGRKCRTNIDLRKHFKQlH 183 9******************98766 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MNSVGNNFTT DLLLLRPPFI NPKPKFMNPK FPNSITLTKP SNPRRITCCS TPNTSSSSSS 60 TASVTEVDMV KNSQGIWSAK RKRVVVLWDL DNKPPHGPPY QAAMALKKVA LTFGDIVEIF 120 AYANRHAFIH LPHWVRQERN ERRELDILER KGVSIPTDPY VCGVCGRKCR TNIDLRKHFK 180 QLHERERQKK LSRMRSLKGK KRQKFKERFV SGNHKYEEAA RSLIKPKVGY GLAAELRRAG 240 VFVKEVEDKP QAADWAVKRQ MQHSMNSGID WLFLVSDDSD FSEMLKRAQG SSLGTVVIGD 300 SHRALGPHAD FWVPWNGVEN GEIGEEELMS WKSRLEFMER SDHESFSMRG FDEDSDDVDE 360 DDDYSDDDYD DVVEDRNLDQ LVDELVITKT GFHGPRISAF SEGEDEEEY

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MNSVGNNFTT DLLLLRPPFI NPKPKFMNPK FPNSITLTKP SNPRRITCCS TPNTSSSSSS  60
TASVTEVDMV KNSQGIWSAK RKRVVVLWDL DNKPPHGPPY QAAMALKKVA LTFGDIVEIF  120
AYANRHAFIH LPHWVRQERN ERRELDILER KGVSIPTDPY VCGVCGRKCR TNIDLRKHFK  180
QLHERERQKK LSRMRSLKGK KRQKFKERFV SGNHKYEEAA RSLIKPKVGY GLAAELRRAG  240
VFVKEVEDKP QAADWAVKRQ MQHSMNSGID WLFLVSDDSD FSEMLKRAQG SSLGTVVIGD  300
SHRALGPHAD FWVPWNGVEN GEIGEEELMS WKSRLEFMER SDHESFSMRG FDEDSDDVDE  360
DDDYSDDDYD DVVEDRNLDQ LVDELVITKT GFHGPRISAF SEGEDEEEY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52010.1	1e-142	C2H2 family protein