PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026394084.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 598aa MW: 66264.6 Da PI: 6.4698

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026394084.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	52.9	9.2e-17	210	259	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_026394084.1 210 SQYRGVTFYRRTGRWESHIWD------SgKQVYLGGFDTAHAAARAYDRAAIKFRG 259 78*****************......44**********************998 PP
2	AP2	44.5	3.8e-14	302	352	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k++g XP_026394084.1 302 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKYNG 352 89******.7**5553..2.26******99**********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 598 aa Download sequence
MWDLNDSPAN GRGGREEEKE KGLSNSFINN NDQNSSSSVV YMEETGSEEF EEAGSSVTKS 60 RPNQKRTSCS DHYRNNQDNN NNNSNSSKIF GFSMSSTQEE EEEEEEIEDQ GEEVQCSTDN 120 EPSDEVAVTR QFFPVGESSS SPELDHAQMD GGGGSLPRAH WVGVRFCQSG TSVGGGGNTG 180 TELSSASTIS QQQPAQMNKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD SGKQVYLGGF 240 DTAHAAARAY DRAAIKFRGT EADINFSLDD YQDDLKQMTN LTKEEFVHVL RRQSTGFPRG 300 SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDTEVEAA RAYDKAAIKY NGKEAVTNFD 360 PSIYESKDNN HNLDLSLGSS SSSKNSSLES KDDYGSSANA SPLKQFEQGD WRNGGRGFRS 420 TLPDEQSMIS SNPPSREGSN NDQRAAMKMF NNTHIQTPPI SLNNNSKQMN DHHQMQRYDR 480 PFLQSPSFRP PQYQFSSSNS PSNDGGRHMS LGSATGLSLA PAGEHQQQQQ SASSSWMRGG 540 NTTTNASNIW PSGTTNQQQL FATSSAASSG FSSHHQQILK PQNWLLNNGF HHSPMKPP

Sequence ? help Back to Top

Protein Sequence Length: 598 aa Download sequence

MWDLNDSPAN GRGGREEEKE KGLSNSFINN NDQNSSSSVV YMEETGSEEF EEAGSSVTKS  60
RPNQKRTSCS DHYRNNQDNN NNNSNSSKIF GFSMSSTQEE EEEEEEIEDQ GEEVQCSTDN  120
EPSDEVAVTR QFFPVGESSS SPELDHAQMD GGGGSLPRAH WVGVRFCQSG TSVGGGGNTG  180
TELSSASTIS QQQPAQMNKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD SGKQVYLGGF  240
DTAHAAARAY DRAAIKFRGT EADINFSLDD YQDDLKQMTN LTKEEFVHVL RRQSTGFPRG  300
SSKYRGVTLH KCGRWEARMG QFLGKKYVYL GLFDTEVEAA RAYDKAAIKY NGKEAVTNFD  360
PSIYESKDNN HNLDLSLGSS SSSKNSSLES KDDYGSSANA SPLKQFEQGD WRNGGRGFRS  420
TLPDEQSMIS SNPPSREGSN NDQRAAMKMF NNTHIQTPPI SLNNNSKQMN DHHQMQRYDR  480
PFLQSPSFRP PQYQFSSSNS PSNDGGRHMS LGSATGLSLA PAGEHQQQQQ SASSSWMRGG  540
NTTTNASNIW PSGTTNQQQL FATSSAASSG FSSHHQQILK PQNWLLNNGF HHSPMKPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-105	AP2 family protein