PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026394082.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 603aa MW: 66831.2 Da PI: 6.5167

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026394082.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	52.9	9.3e-17	210	259	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_026394082.1 210 SQYRGVTFYRRTGRWESHIWD------SgKQVYLGGFDTAHAAARAYDRAAIKFRG 259 78*****************......44**********************998 PP
2	AP2	45.5	1.9e-14	302	357	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + n +++++lg f+t+ eAa+a+++a+ k++g XP_026394082.1 302 SKYRGVTLHK-CGRWEARMGQFLGkNSsLHRYVYLGLFDTEVEAARAYDKAAIKYNG 357 89******.7**888655466788******99**********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MWDLNDSPAN GRGGREEEKE KGLSNSFINN NDQNSSSSVV YMEETGSEEF EEAGSSVTKS 60 RPNQKRTSCS DHYRNNQDNN NNNSNSSKIF GFSMSSTQEE EEEEEEIEDQ GEEVQCSTDN 120 EPSDEVAVTR QFFPVGESSS SPELDHAQMD GGGGSLPRAH WVGVRFCQSG TSVGGGGNTG 180 TELSSASTIS QQQPAQMNKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD SGKQVYLGGF 240 DTAHAAARAY DRAAIKFRGT EADINFSLDD YQDDLKQMTN LTKEEFVHVL RRQSTGFPRG 300 SSKYRGVTLH KCGRWEARMG QFLGKNSSLH RYVYLGLFDT EVEAARAYDK AAIKYNGKEA 360 VTNFDPSIYE SKDNNHNLDL SLGSSSSSKN SSLESKDDYG SSANASPLKQ FEQGDWRNGG 420 RGFRSTLPDE QSMISSNPPS REGSNNDQRA AMKMFNNTHI QTPPISLNNN SKQMNDHHQM 480 QRYDRPFLQS PSFRPPQYQF SSSNSPSNDG GRHMSLGSAT GLSLAPAGEH QQQQQSASSS 540 WMRGGNTTTN ASNIWPSGTT NQQQLFATSS AASSGFSSHH QQILKPQNWL LNNGFHHSPM 600 KPP

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MWDLNDSPAN GRGGREEEKE KGLSNSFINN NDQNSSSSVV YMEETGSEEF EEAGSSVTKS  60
RPNQKRTSCS DHYRNNQDNN NNNSNSSKIF GFSMSSTQEE EEEEEEIEDQ GEEVQCSTDN  120
EPSDEVAVTR QFFPVGESSS SPELDHAQMD GGGGSLPRAH WVGVRFCQSG TSVGGGGNTG  180
TELSSASTIS QQQPAQMNKK SRRGPRSRSS QYRGVTFYRR TGRWESHIWD SGKQVYLGGF  240
DTAHAAARAY DRAAIKFRGT EADINFSLDD YQDDLKQMTN LTKEEFVHVL RRQSTGFPRG  300
SSKYRGVTLH KCGRWEARMG QFLGKNSSLH RYVYLGLFDT EVEAARAYDK AAIKYNGKEA  360
VTNFDPSIYE SKDNNHNLDL SLGSSSSSKN SSLESKDDYG SSANASPLKQ FEQGDWRNGG  420
RGFRSTLPDE QSMISSNPPS REGSNNDQRA AMKMFNNTHI QTPPISLNNN SKQMNDHHQM  480
QRYDRPFLQS PSFRPPQYQF SSSNSPSNDG GRHMSLGSAT GLSLAPAGEH QQQQQSASSS  540
WMRGGNTTTN ASNIWPSGTT NQQQLFATSS AASSGFSSHH QQILKPQNWL LNNGFHHSPM  600
KPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-102	AP2 family protein