PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026393717.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 707aa    MW: 78315.8 Da    PI: 5.9831
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026393717.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.32.3e-0797124226
                     -S---SGGGGTS...--TTTTT-SS-SS CS
         zf-CCCH   2 ktelCrffartG...tCkyGdrCkFaHg 26 
                     kt +C+  a+tG    C yG  C+F+H+
  XP_026393717.1  97 KTGICPKVAKTGcvsSCTYGTDCRFSHD 124
                     899************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 707 aa     Download sequence    
MDGASTIEEV EAVETPTVIS NPVANVVLTP EELIAKSIAP VKKEFLRPPQ HTRPCPNVKG  60
EDGVSSETNE SDGYHSKYSK NTKSKRQLKR ERQEEKKTGI CPKVAKTGCV SSCTYGTDCR  120
FSHDVDAYKA QKPVDLEGNC PFLSLEGPCP YGLACRYSGT HKDENAMEIV GMGNERYETN  180
ELKKAVQKLL WKNVMTFPKA DAQLKALGIL DNYKLKKGKA KGEGGEVEKV EVEGEVEMVE  240
ADQGIVNGSS TAFENDSGEN GASTNKTECT EEVKLEEGNV KISLSTDGPR PIKMAKHSNG  300
EPCSDDMDNG TGSMKNDLEM RTEVEASQTD DISSEADACL KLHPREKKLI DFSGKLYLAP  360
LTTVGNLPFR RVCKNLGADI TCGEMAMCTN LLQGQASEWA LLRRHSSEDL FGVQICGSFP  420
DTIARTVELI DRECTVDFID INMGCPIDLV VDKGAGSCLL TKPVRMKGII KAASATVDTP  480
ITVKVRTAYF EGKNRIDSLI SDIGSWGATA LTIHGRSRQQ RYSKLADWDY IYQCARKAPD  540
SLQVLGNGDI FSYVDWNKHL SDCPKISACM IARGSLIKPW LFTEIKEQRH WDISSSERLG  600
IYKDYVRCGL QHWGSDTKGV ETTRYFLLEW LSYLYRYIPV GLLDVVPSKL NWRSPSFYGR  660
DDLETLMASE SAADWIRISE MLLGKVPAGF HFAPKHKSNA YDKAENG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.15e-06C3H family protein