PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026393671.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 380aa    MW: 41518.9 Da    PI: 6.7173
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026393671.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.71.6e-18298332135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+Cg+ kTp+WR gp g ktLCnaCG+++++ +l
  XP_026393671.1 298 CSHCGVQKTPQWRTGPLGAKTLCNACGVRFKSGRL 332
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MECVEAKAFK TSLWRPEMLV KSSSNHHDEE VSKFSLWGSS NNNGGTPTNG DETFVDDLLD  60
FSNEETGGIV KEDKEEEYET VDDNNSTEMK TVFSPEKNSA SLKNDFAAVF ASELSVPTDD  120
LADLEWLSHF VEDSFSEEFS QTQYNDGNPT VLAQPKAQNL DKTEPEKKQP PQFIKTESIE  180
TVGYYGFSPQ PPPPTTTTAA TTVPGKARSK RSRTGGRVWS LGYSSLTETS SSSTSTTTTT  240
SSTTSSSSSC LLFNNIMRTP DYLVSLRKPP VIRHKKQRVV NGDDNGGGGG ARVVRTQCSH  300
CGVQKTPQWR TGPLGAKTLC NACGVRFKSG RLLPEYRPAS SPTFSKAVHS NSHRKVLEMR  360
KNKAVVAAPE AGFTSAVHSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.27e-52GATA family protein