PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026393591.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 501aa MW: 55203.8 Da PI: 7.6972

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026393591.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.5	6.3e-05	377	415	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++++L++l+ + +K + a++L +A+ YIk Lq XP_026393591.1 377 RKEKLGDRIANLQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 415 7788899*******998.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MEQYSGNLHH HHHHHHHHHQ LQEQLNIVGS SSSSTSSLST PPPPPPFYQL LGINNSSSTW 60 NQNLILNNGG NYFNQNGNVN GITGSPRDEV ISRQSKNNND DDIHHFVPPS LNTSTIHHQN 120 QDLSNFHGRG FIDVNDQSLH ELHLAKIKKE LLLSSSSSLD SHHASKLFSN EAIMNNTFSK 180 NYFKNENQLQ DFYEEDLSST NTHLGDLYNN NPETFTGFGN SFNPLSRVHG NNFSQMMILP 240 STTISNADSN PQSFTSATTN TSPLGLSSFQ ALDLLSSSST KNIGGGFDPD QTNSLFKDRS 300 LSLNLYNNDM NPGVINNNWP STNNPSKVNS LINGVTDAAK RPRPPGSSGN PKKTPQTTPV 360 KKPRTESRSS IPPLKVRKEK LGDRIANLQQ LVAPFGKTDT ASVLMEAIGY IKFLQEQVET 420 LSVPYMKSGR NNNAMRPKFQ QGTSNARGGE VDTNEPKRDL RSRGLCLVPL SCTSYIITDD 480 NSLSHVNWST SGLPHFGGGS I

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MEQYSGNLHH HHHHHHHHHQ LQEQLNIVGS SSSSTSSLST PPPPPPFYQL LGINNSSSTW  60
NQNLILNNGG NYFNQNGNVN GITGSPRDEV ISRQSKNNND DDIHHFVPPS LNTSTIHHQN  120
QDLSNFHGRG FIDVNDQSLH ELHLAKIKKE LLLSSSSSLD SHHASKLFSN EAIMNNTFSK  180
NYFKNENQLQ DFYEEDLSST NTHLGDLYNN NPETFTGFGN SFNPLSRVHG NNFSQMMILP  240
STTISNADSN PQSFTSATTN TSPLGLSSFQ ALDLLSSSST KNIGGGFDPD QTNSLFKDRS  300
LSLNLYNNDM NPGVINNNWP STNNPSKVNS LINGVTDAAK RPRPPGSSGN PKKTPQTTPV  360
KKPRTESRSS IPPLKVRKEK LGDRIANLQQ LVAPFGKTDT ASVLMEAIGY IKFLQEQVET  420
LSVPYMKSGR NNNAMRPKFQ QGTSNARGGE VDTNEPKRDL RSRGLCLVPL SCTSYIITDD  480
NSLSHVNWST SGLPHFGGGS I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	340	344	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	3e-44	bHLH family protein