PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026393401.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 494aa MW: 54592.2 Da PI: 7.6358

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026393401.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.6	6.2e-05	370	408	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++++L++l+ + +K + a++L +A+ YIk Lq XP_026393401.1 370 RKEKLGDRIANLQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 408 7788899*******998.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MEQYSGNLHH HHQHHHHHQL QEQLNIVGSS SSSSTSSLSP PPPPPFYQLL GINNSSSTWN 60 QNLILNNGGN YFNQNSNVNG ITGSPRDEVI SRQSKNNNDD DIHHFVPPSL NTSTIHHQNQ 120 DLSNFHGRGF IDVNDQSLHE LHLAKIKKEL LLSSSSSLDS HHASKLFSNE AIMNNTFSKN 180 YFKNENQLQD FYEEDHLGDL YNNNPETFTG FGNSFNPLSR VHSNNFCQMM VLPSTTISNA 240 DSNPQSFTST TTNTSPLGLS SFQALDLLSS SSTKNISGGF DPDQTNSLFK DRSLSLNLYN 300 NDMNPGVINN NWPSTNNPSK VNSLINGVTD AAKRPRPPGS SGNPKKTPQT TPVKKPRTES 360 RSSIPPLKVR KEKLGDRIAN LQQLVAPFGK TDTASVLMEA IGYIKFLQEQ VETLSVPYMK 420 SGRNNNAMRP KFQQGMSNAR GGEVDTNEPK RDLRSRGLCL VPLSCTSYII TDDNSLSHVN 480 WSTSGLPHFG GGSI

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MEQYSGNLHH HHQHHHHHQL QEQLNIVGSS SSSSTSSLSP PPPPPFYQLL GINNSSSTWN  60
QNLILNNGGN YFNQNSNVNG ITGSPRDEVI SRQSKNNNDD DIHHFVPPSL NTSTIHHQNQ  120
DLSNFHGRGF IDVNDQSLHE LHLAKIKKEL LLSSSSSLDS HHASKLFSNE AIMNNTFSKN  180
YFKNENQLQD FYEEDHLGDL YNNNPETFTG FGNSFNPLSR VHSNNFCQMM VLPSTTISNA  240
DSNPQSFTST TTNTSPLGLS SFQALDLLSS SSTKNISGGF DPDQTNSLFK DRSLSLNLYN  300
NDMNPGVINN NWPSTNNPSK VNSLINGVTD AAKRPRPPGS SGNPKKTPQT TPVKKPRTES  360
RSSIPPLKVR KEKLGDRIAN LQQLVAPFGK TDTASVLMEA IGYIKFLQEQ VETLSVPYMK  420
SGRNNNAMRP KFQQGMSNAR GGEVDTNEPK RDLRSRGLCL VPLSCTSYII TDDNSLSHVN  480
WSTSGLPHFG GGSI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	333	337	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	3e-44	bHLH family protein