PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026393226.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 391aa    MW: 44084 Da    PI: 5.2978
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026393226.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.44.6e-07295336854
                     HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     + r RR+ri +++  L++l+P  a      K + a++L + v+YIk L
  XP_026393226.1 295 AARHRRERISERIRVLQRLVPGgA------KTDTASVLDEPVRYIKFL 336
                     6699*****************966......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MNLFIGSLKL VKIVVFDLAN EDLAEMPTAL PTYWNFSLGV LGGYLLADHY DKDSKTSDIW  60
LLKKKDDGSL SWIEEFSISN TDTQEIVQDS LVLTGRGTVL CHSETKVLIH DLNSSSSKVL  120
VDFGKDKRIF QAIPHMSTLV SLKALGEENT KTMETIDVPR KNTWDNLVMA SVEQSNPIAT  180
PYLHGDQLAD NVIFENLNSQ PVTQPASSCS SHYAPMHSSD HEHQQQQQLI RTISCSEEKK  240
QVKGEEGSEE EEELGAVKEM MYLIAAMQPI DIGPVTLAKP KRENIRVSND PHLVAARHRR  300
ERISERIRVL QRLVPGGAKT DTASVLDEPV RYIKFLKKQV IKLQLSDQNS PRIAVPIIND  360
EYHWHVPSSE NNIFTFMETM PPSTEDYYIP S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.13e-27bHLH family protein