PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026393222.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 344aa    MW: 39209.4 Da    PI: 7.1644
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026393222.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.86.5e-12205230126
                     --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                     y   +C+++ +tG+C +Gd+CkF+H+
  XP_026393222.1 205 YQPDICKDYKETGYCGFGDSCKFMHD 230
                     67789********************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MEDSETSSNV PERSSEPSST NTVKEPSKEP VCSFFRKPSK NKNIRKRKND DEEEDNGEEG  60
SSVIQKPKLA PKADNKLHFS TGTSTKHVAE TNQDPDESRR FHFESSKVIQ VQHDSRATAT  120
LETETDFSND ARAIRERVLK RAEEALKKNK DKKPSDEKLY KGIHGYTDFK AGFRREHTVA  180
GEKAGGAHGP LRASAHIRTS ARWDYQPDIC KDYKETGYCG FGDSCKFMHD RGDYKSGWQM  240
EREWEEAEKI RKRNLALKAD DDDEDENEKA NASDDDEDAL PFACFICRQA FVDPVVTKCK  300
HYFCEHCALK HHSKNKKCFV CNTPTLGMFN TAHEIKRKMA AEGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01350.11e-138C3H family protein