PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026393222.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C3H | ||||||||
Protein Properties | Length: 344aa MW: 39209.4 Da PI: 7.1644 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 36.8 | 6.5e-12 | 205 | 230 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 y +C+++ +tG+C +Gd+CkF+H+ XP_026393222.1 205 YQPDICKDYKETGYCGFGDSCKFMHD 230 67789********************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence |
MEDSETSSNV PERSSEPSST NTVKEPSKEP VCSFFRKPSK NKNIRKRKND DEEEDNGEEG 60 SSVIQKPKLA PKADNKLHFS TGTSTKHVAE TNQDPDESRR FHFESSKVIQ VQHDSRATAT 120 LETETDFSND ARAIRERVLK RAEEALKKNK DKKPSDEKLY KGIHGYTDFK AGFRREHTVA 180 GEKAGGAHGP LRASAHIRTS ARWDYQPDIC KDYKETGYCG FGDSCKFMHD RGDYKSGWQM 240 EREWEEAEKI RKRNLALKAD DDDEDENEKA NASDDDEDAL PFACFICRQA FVDPVVTKCK 300 HYFCEHCALK HHSKNKKCFV CNTPTLGMFN TAHEIKRKMA AEGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01350.1 | 1e-138 | C3H family protein |