PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026393124.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 422aa    MW: 47094.9 Da    PI: 7.5205
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026393124.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.73.2e-06317359754
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      + r RR++i ++ ++L +l+P        K++ ae+   A +YIk L
  XP_026393124.1 317 VAARERRRKISEKTQQLEKLIPGG-----SKMNTAEMFHAAYKYIKFL 359
                     56799*****************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MRLTGVILLS QPEMRPTRRF KEKLVFSGAS NYDIEFEITK DTKKNYLLLP SFVNLALTAV  60
VRKNVGSVGF LPMGTFNKSI GIGSQKIVKM NNNSSNDLMM SANSSPLMNT SFMSNTSSNS  120
SCITGITTDN AMFFEQEEEE YFYTSTTTTT DVNNNNNLLP YFSYSSTNDY YGDEPTMFST  180
QSSMAPHDAF INIPSGDYDF NSTTTTPTCT YHYPKRQRIS SQHLSSTTTT TTTFHAENSF  240
SFVNNGVAYN PNSSNNFNNP SGSHYDYHLP KPYLLPSATT SNAAMPAGQN YPCGNYNGMS  300
SSNAKKSKTG YLSSQSVAAR ERRRKISEKT QQLEKLIPGG SKMNTAEMFH AAYKYIKFLR  360
AQIGVLEFMG SIQENDKMDY LTPVLEVLLR SIKVQEMLYV EEMCLVAKEL FDTCAAQTLI  420
SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.13e-22bHLH family protein