PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026392857.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 515aa MW: 57221.1 Da PI: 6.7388

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026392857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.9	3.2e-31	151	208	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkg efprsYY+Ct+++C+vkk++ers+ d++v+ei+Y+g+H+h+k XP_026392857.1 151 EDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCQVKKQLERSH-DGQVTEIIYKGKHDHPK 208 7**************************************.*************85 PP
2	WRKY	107.5	6.4e-34	322	380	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_026392857.1 322 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 380 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MHDSAFSDTF PVPRNTSNNS TFDERSFGDF EFKPHVRSSL GSVVSSFGPM ASAGLNQKQF 60 ESFMQMQGQC LSPTFASSPK SETREPSSHG LTLSVNAPNV PIETITSKAC GPVEIASGES 120 LQIPNSETAI QPMDCDDKGA STVVTAERSS EDGYNWRKYG QKHVKGCEFP RSYYKCTHPN 180 CQVKKQLERS HDGQVTEIIY KGKHDHPKPQ PSRRMAVGTV ISMQEERSDR FSSLTAREDK 240 THGMPSHHAE PNGIHDVSPV MASDDNVENA QLNRNGDELD DDDDPESKRR KKDLGGIDVT 300 LMGKATREPR VVVQTLSEVD ILDDGYRWRK YGQKVVKGNP NPRSYYKCTN AGCPVRKHVE 360 RASHDPKAVI TTYEGKHNHD VPSARNSTHE PAEPTNYNAS SNGMLRVRQE ENDSISLDLG 420 VGMTSSPENR LNEKQHQTFH GGPIENRSFM NHPGCSNVLQ ATQVSAHYGS LIDGTDRYNP 480 SREDQTKSFT FETPPPLNHS TNQYQQSLGR LIMGP

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MHDSAFSDTF PVPRNTSNNS TFDERSFGDF EFKPHVRSSL GSVVSSFGPM ASAGLNQKQF  60
ESFMQMQGQC LSPTFASSPK SETREPSSHG LTLSVNAPNV PIETITSKAC GPVEIASGES  120
LQIPNSETAI QPMDCDDKGA STVVTAERSS EDGYNWRKYG QKHVKGCEFP RSYYKCTHPN  180
CQVKKQLERS HDGQVTEIIY KGKHDHPKPQ PSRRMAVGTV ISMQEERSDR FSSLTAREDK  240
THGMPSHHAE PNGIHDVSPV MASDDNVENA QLNRNGDELD DDDDPESKRR KKDLGGIDVT  300
LMGKATREPR VVVQTLSEVD ILDDGYRWRK YGQKVVKGNP NPRSYYKCTN AGCPVRKHVE  360
RASHDPKAVI TTYEGKHNHD VPSARNSTHE PAEPTNYNAS SNGMLRVRQE ENDSISLDLG  420
VGMTSSPENR LNEKQHQTFH GGPIENRSFM NHPGCSNVLQ ATQVSAHYGS LIDGTDRYNP  480
SREDQTKSFT FETPPPLNHS TNQYQQSLGR LIMGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	1e-127	WRKY family protein