PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026392855.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 658aa MW: 72884.2 Da PI: 6.4776

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026392855.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.4	4.5e-31	294	351	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkg efprsYY+Ct+++C+vkk++ers+ d++v+ei+Y+g+H+h+k XP_026392855.1 294 EDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCQVKKQLERSH-DGQVTEIIYKGKHDHPK 351 7**************************************.*************85 PP
2	WRKY	107.1	8.9e-34	465	523	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_026392855.1 465 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 523 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 658 aa Download sequence
MEEGNVQSEV RDSYGRVIEE ENRVHEVRFD TSNGGNENGF TFGSSDNNNN NNGLRNLGEE 60 EKNDLCIKSS DYRSINFSSG SSNNTSAARY KSMSPAMLPI SRSPCLTIPP GLSPTSLLDS 120 PVFLSNMKAE PSPTTGTFFK HHIMHDSAFS DTFPVPRNTS NNSTFDERSF GDFEFKPHVR 180 SSLGSVVSSF GPMASAGLNQ KQFESFMQMQ GQCLSPTFAS SPKSETREPS SHGLTLSVNA 240 PNVPIETITS KACGPVEIAS GESLQIPNSE TAIQPMDCDD KGASTVVTAE RSSEDGYNWR 300 KYGQKHVKGC EFPRSYYKCT HPNCQVKKQL ERSHDGQVTE IIYKGKHDHP KPQPSRRMAV 360 GTVISMQEER SDRFSSLTAR EDKTHGMPSH HAEPNGIHDV SPVMASDDNV ENAQLNRNGD 420 ELDDDDDPES KRRKKDLGGI DVTLMGKATR EPRVVVQTLS EVDILDDGYR WRKYGQKVVK 480 GNPNPRSYYK CTNAGCPVRK HVERASHDPK AVITTYEGKH NHDVPSARNS THEPAEPTNY 540 NASSNGMLRV RQEENDSISL DLGVGMTSSP ENRLNEKQHQ TFHGGPIENR SFMNHPGCSN 600 VLQATQVSAH YGSLIDGTDR YNPSREDQTK SFTFETPPPL NHSTNQYQQS LGRLIMGP

Sequence ? help Back to Top

Protein Sequence Length: 658 aa Download sequence

MEEGNVQSEV RDSYGRVIEE ENRVHEVRFD TSNGGNENGF TFGSSDNNNN NNGLRNLGEE  60
EKNDLCIKSS DYRSINFSSG SSNNTSAARY KSMSPAMLPI SRSPCLTIPP GLSPTSLLDS  120
PVFLSNMKAE PSPTTGTFFK HHIMHDSAFS DTFPVPRNTS NNSTFDERSF GDFEFKPHVR  180
SSLGSVVSSF GPMASAGLNQ KQFESFMQMQ GQCLSPTFAS SPKSETREPS SHGLTLSVNA  240
PNVPIETITS KACGPVEIAS GESLQIPNSE TAIQPMDCDD KGASTVVTAE RSSEDGYNWR  300
KYGQKHVKGC EFPRSYYKCT HPNCQVKKQL ERSHDGQVTE IIYKGKHDHP KPQPSRRMAV  360
GTVISMQEER SDRFSSLTAR EDKTHGMPSH HAEPNGIHDV SPVMASDDNV ENAQLNRNGD  420
ELDDDDDPES KRRKKDLGGI DVTLMGKATR EPRVVVQTLS EVDILDDGYR WRKYGQKVVK  480
GNPNPRSYYK CTNAGCPVRK HVERASHDPK AVITTYEGKH NHDVPSARNS THEPAEPTNY  540
NASSNGMLRV RQEENDSISL DLGVGMTSSP ENRLNEKQHQ TFHGGPIENR SFMNHPGCSN  600
VLQATQVSAH YGSLIDGTDR YNPSREDQTK SFTFETPPPL NHSTNQYQQS LGRLIMGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-156	WRKY family protein