PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026392689.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 592aa MW: 65568.5 Da PI: 6.4112

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026392689.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.2	2.3e-30	328	386	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a Cpv+k+v+r+aed +++++tYeg+Hnh+ XP_026392689.1 328 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaACPVRKQVQRCAEDRTILITTYEGTHNHP 386 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MNRLAGGEIA YNSDPFRNFF PSKPPSFMDT NATNFHGSGF TMNLINSNDH HQQHEKRAVV 60 DEMDFFSSDK NRVREYDQNK GAKDMMIKKE DSHGGSSSRF SHDVNTGLNL LTANTLSDQS 120 TVDDDGISPN ADDKRSKNEL EALQQDLNRM NSENQKLKGM LNQVTNNYNT LQMQLVVLMQ 180 QKSPKIETSQ EHEMVNVAKH EENRVNEMIP RQFMDLGLAT TNTEVDELSH SSSEGKSRDR 240 SRTPINTSLE ESSLQKKEMV LFDHQEKSEL DSSRDNEESL EDHPSQGWVP NKIPKLNVES 300 QQQQQPMEAT MRKPRVSVRA RSEAPMITDG CQWRKYGQKM AKGNPCPRAY YRCTMAAACP 360 VRKQVQRCAE DRTILITTYE GTHNHPLPPA AMAMASTTST AATMLLSGSM SSADGLMNSN 420 FLTRTLLPCS SSMVTISASA PFPTVTLDLT QSPNNPLQFQ RPTTQFHVPF MNQSPSQGFG 480 SQQTAQPQLP QLFGQSPYNQ SKFSGLQMSS QNGDQAHRSN NHQSPPRQQQ QAQTNSLEDT 540 VSAATAAITA DPNFTAALAA AISSIMSGGG QQTMNNNSSS CNTTSNTNNS TD

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MNRLAGGEIA YNSDPFRNFF PSKPPSFMDT NATNFHGSGF TMNLINSNDH HQQHEKRAVV  60
DEMDFFSSDK NRVREYDQNK GAKDMMIKKE DSHGGSSSRF SHDVNTGLNL LTANTLSDQS  120
TVDDDGISPN ADDKRSKNEL EALQQDLNRM NSENQKLKGM LNQVTNNYNT LQMQLVVLMQ  180
QKSPKIETSQ EHEMVNVAKH EENRVNEMIP RQFMDLGLAT TNTEVDELSH SSSEGKSRDR  240
SRTPINTSLE ESSLQKKEMV LFDHQEKSEL DSSRDNEESL EDHPSQGWVP NKIPKLNVES  300
QQQQQPMEAT MRKPRVSVRA RSEAPMITDG CQWRKYGQKM AKGNPCPRAY YRCTMAAACP  360
VRKQVQRCAE DRTILITTYE GTHNHPLPPA AMAMASTTST AATMLLSGSM SSADGLMNSN  420
FLTRTLLPCS SSMVTISASA PFPTVTLDLT QSPNNPLQFQ RPTTQFHVPF MNQSPSQGFG  480
SQQTAQPQLP QLFGQSPYNQ SKFSGLQMSS QNGDQAHRSN NHQSPPRQQQ QAQTNSLEDT  540
VSAATAAITA DPNFTAALAA AISSIMSGGG QQTMNNNSSS CNTTSNTNNS TD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	1e-108	WRKY family protein