PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026392535.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 735aa    MW: 80453.2 Da    PI: 6.074
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026392535.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.85.1e-2062117156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+  qVk+WFqN+R+++k
  XP_026392535.1  62 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELGRELGLEPLQVKFWFQNKRTQMK 117
                     688999***********************************************999 PP
2START208.72.2e-652534742206
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     la  a++el+++++++ep+Wv  +    e++ +de++++f+++ +      ++ea+r s+ v+m++++lve+l+d + +W+  +     +a t+e
  XP_026392535.1 253 LAVGAMEELIRMVQLGEPLWVAGPdgatEILSEDEYMRTFPRGIGpkpfgLKTEASRQSADVIMNHMNLVEILMDAG-RWSSLFSsivsRAVTVE 346
                     78899*************************************999********************************.77777777777****** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     v+s+g      galq+m+ae+q++splvp R+++fvRy++q+++ +w++vdvS+++  +   s++v R++++pSg+li++++ng skv+wvehv+
  XP_026392535.1 347 VLSTGvagnfnGALQVMTAEFQVPSPLVPtRESLFVRYCKQHSDNTWAVVDVSLEHLHPS--SPPVSRCRRRPSGCLIQEMPNGCSKVVWVEHVE 439
                     ********************************************************9875..79******************************* PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++r +h+++rslv+s l +gak+w atl+rqce+
  XP_026392535.1 440 VDDRAVHSIYRSLVNSALGFGAKRWIATLDRQCER 474
                     *********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 735 aa     Download sequence    
MNMFQPNMFD HTQHNPLDMM SDNDLARISN TVDEFDSKSG SEYLEGGSGD DQADPTTQRA  60
KKKRYHRHTQ HQIQEMEAFF KECPHPDDKQ RKELGRELGL EPLQVKFWFQ NKRTQMKTQH  120
ERHENTQLRM ENDKLRAENM RYKEALSNAS CPNCGGPTSL GEMSFDEHHL RIENARLREE  180
IDRILAIAAK YVGKPMGSSF PLLPPPIPSR SSLDLGVGIQ GGIRGDIVGG GGDLLRSLSG  240
ALTEADKPVI IELAVGAMEE LIRMVQLGEP LWVAGPDGAT EILSEDEYMR TFPRGIGPKP  300
FGLKTEASRQ SADVIMNHMN LVEILMDAGR WSSLFSSIVS RAVTVEVLST GVAGNFNGAL  360
QVMTAEFQVP SPLVPTRESL FVRYCKQHSD NTWAVVDVSL EHLHPSSPPV SRCRRRPSGC  420
LIQEMPNGCS KVVWVEHVEV DDRAVHSIYR SLVNSALGFG AKRWIATLDR QCERLASVMA  480
STTFLADPVI NNQEGRKSML KLSERMVMSF CSGVSASTTH TWTTLSGSGA EDVRVMTRKS  540
VDDPGRPPGI VLNAATSFWL PVPPKRIFDF LRDENSRKEW DILSNGGDVQ EMAHIANGRD  600
PGNCVSLLRV HGVHSANSSP NNMLILQESC TNATGSFVIY APVDIAAMNA VLNGEDPDYV  660
ALLPSGFAIL PDGPTVHGGG TAAVESGGSL LTVAFQILVD SIPTAKLSLG SVATVNSLIS  720
CTVERIKAAV NSDSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein