PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026392532.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 759aa    MW: 83226.4 Da    PI: 6.4061
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026392532.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.75.3e-2086141156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+  qVk+WFqN+R+++k
  XP_026392532.1  86 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELGRELGLEPLQVKFWFQNKRTQMK 141
                     688999***********************************************999 PP
2START208.62.4e-652774982206
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     la  a++el+++++++ep+Wv  +    e++ +de++++f+++ +      ++ea+r s+ v+m++++lve+l+d + +W+  +     +a t+e
  XP_026392532.1 277 LAVGAMEELIRMVQLGEPLWVAGPdgatEILSEDEYMRTFPRGIGpkpfgLKTEASRQSADVIMNHMNLVEILMDAG-RWSSLFSsivsRAVTVE 370
                     78899*************************************999********************************.77777777777****** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                     v+s+g      galq+m+ae+q++splvp R+++fvRy++q+++ +w++vdvS+++  +   s++v R++++pSg+li++++ng skv+wvehv+
  XP_026392532.1 371 VLSTGvagnfnGALQVMTAEFQVPSPLVPtRESLFVRYCKQHSDNTWAVVDVSLEHLHPS--SPPVSRCRRRPSGCLIQEMPNGCSKVVWVEHVE 463
                     ********************************************************9875..79******************************* PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++r +h+++rslv+s l +gak+w atl+rqce+
  XP_026392532.1 464 VDDRAVHSIYRSLVNSALGFGAKRWIATLDRQCER 498
                     *********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 759 aa     Download sequence    
MMIRNGKLEG FGSFTSSRHR LTHQMNMFQP NMFDHTQHNP LDMMSDNDLA RISNTVDEFD  60
SKSGSEYLEG GSGDDQADPT TQRAKKKRYH RHTQHQIQEM EAFFKECPHP DDKQRKELGR  120
ELGLEPLQVK FWFQNKRTQM KTQHERHENT QLRMENDKLR AENMRYKEAL SNASCPNCGG  180
PTSLGEMSFD EHHLRIENAR LREEIDRILA IAAKYVGKPM GSSFPLLPPP IPSRSSLDLG  240
VGIQGGIRGD IVGGGGDLLR SLSGALTEAD KPVIIELAVG AMEELIRMVQ LGEPLWVAGP  300
DGATEILSED EYMRTFPRGI GPKPFGLKTE ASRQSADVIM NHMNLVEILM DAGRWSSLFS  360
SIVSRAVTVE VLSTGVAGNF NGALQVMTAE FQVPSPLVPT RESLFVRYCK QHSDNTWAVV  420
DVSLEHLHPS SPPVSRCRRR PSGCLIQEMP NGCSKVVWVE HVEVDDRAVH SIYRSLVNSA  480
LGFGAKRWIA TLDRQCERLA SVMASTTFLA DPVINNQEGR KSMLKLSERM VMSFCSGVSA  540
STTHTWTTLS GSGAEDVRVM TRKSVDDPGR PPGIVLNAAT SFWLPVPPKR IFDFLRDENS  600
RKEWDILSNG GDVQEMAHIA NGRDPGNCVS LLRVHGVHSA NSSPNNMLIL QESCTNATGS  660
FVIYAPVDIA AMNAVLNGED PDYVALLPSG FAILPDGPTV HGGGTAAVES GGSLLTVAFQ  720
ILVDSIPTAK LSLGSVATVN SLISCTVERI KAAVNSDSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein