PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026392420.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 517aa MW: 57145.1 Da PI: 5.8207

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026392420.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.9	2.3e-05	401	438	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L XP_026392420.1 401 RKEKLGDRITALQQLVSPF-----GKTDTASVLFEAIEYIKFL 438 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MAEEFQQSGI CSGNWWNSDR INGSNSLPFS TATNDVGFNS YVGSWRHNNT SIDHHHHYPI 60 SSLEMNKTRS STDESGGTSV SGSSSIVYQD IQKPQESDSV GHEGGGNSSD SILMDSTLQM 120 MGFSLSSSSV PSLDWNNQNY LSDNNRSRNG RADEGDDDQV LKDWSNDMKS FSSCGGSGGE 180 DSSSTITSLK QINIGFALDQ QQQQPQSSDC TVTCEGLPTS FPINSSTLYG CPTNLLQGLF 240 EPDHNLPPPS GASYPEENRT MDFNNPSLTN YIMNSSNDLS SNNTTWQKLS HQFLKTTTSP 300 PTQQPTSNNN QSLYFSNDAP FWNASAASMT NDRSSFLPSS QQIQLLTSNF EENKPYPSNH 360 AVKPKKSEEV NDSSSALKKS NNEPSFKRPR IETPLPTFKV RKEKLGDRIT ALQQLVSPFG 420 KTDTASVLFE AIEYIKFLHD QVSVLSAPYL KNSGAHIQHH HKNSNKSRDH NGQGNRNYHQ 480 QDLRSRGLCL VPISSTFPVT NETATDFWTP TFGSTYR

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MAEEFQQSGI CSGNWWNSDR INGSNSLPFS TATNDVGFNS YVGSWRHNNT SIDHHHHYPI  60
SSLEMNKTRS STDESGGTSV SGSSSIVYQD IQKPQESDSV GHEGGGNSSD SILMDSTLQM  120
MGFSLSSSSV PSLDWNNQNY LSDNNRSRNG RADEGDDDQV LKDWSNDMKS FSSCGGSGGE  180
DSSSTITSLK QINIGFALDQ QQQQPQSSDC TVTCEGLPTS FPINSSTLYG CPTNLLQGLF  240
EPDHNLPPPS GASYPEENRT MDFNNPSLTN YIMNSSNDLS SNNTTWQKLS HQFLKTTTSP  300
PTQQPTSNNN QSLYFSNDAP FWNASAASMT NDRSSFLPSS QQIQLLTSNF EENKPYPSNH  360
AVKPKKSEEV NDSSSALKKS NNEPSFKRPR IETPLPTFKV RKEKLGDRIT ALQQLVSPFG  420
KTDTASVLFE AIEYIKFLHD QVSVLSAPYL KNSGAHIQHH HKNSNKSRDH NGQGNRNYHQ  480
QDLRSRGLCL VPISSTFPVT NETATDFWTP TFGSTYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	5e-53	bHLH family protein