PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026392109.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 477aa MW: 52257 Da PI: 8.9834 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.7 | 4.3e-05 | 70 | 90 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F r nL+ H r H XP_026392109.1 70 CEICGKGFQRDQNLQLHRRGH 90 *******************88 PP | |||||||
2 | zf-C2H2 | 12.4 | 0.00047 | 144 | 166 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_026392109.1 144 WKCEKCSKRYAVQSDQKAHAKTC 166 58******************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 477 aa Download sequence |
MLMINKMATG EPIMGSVFNH QNPADFVVGS INNPLPNIKK KRNLPGTPDP EAEVIALSPK 60 TLMATNRFLC EICGKGFQRD QNLQLHRRGH NLPWKLRQRS SKEPKKRVYV CPEKGCVHNH 120 PSRALGDLTG IKKHFCRKHG EKKWKCEKCS KRYAVQSDQK AHAKTCGTRE YKCDCGTLFS 180 RRDSFLTHRA FCDALAEETA RVTAANINHS IGNNNGCINY QFVGSSLGPN MVQHFSSIFK 240 PIPTNDEELS NKHNTPGLSL WMGQGSQVNP IGNTTTTIQE LHQMGSSNSG TLYGDPFSCS 300 NAHQQSDYQL DWVLGRKLSS TSSGELLTSI KEDGSPQLLS APSLYSTQHQ QQPSMANMSA 360 TALLQKAAQL GATTVTNPSV LMSFGVKSSD DHNQDVSKFN GFCFGSNLSA NTNLGSLAET 420 PLLDLSATSI NQFEMYTPAA KRRKLEDAEG GQTRDFLGVG VKTTTAAICP SSINGWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44160.1 | 1e-132 | C2H2 family protein |