PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026392069.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 445aa MW: 49229.3 Da PI: 7.2861

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026392069.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	93.1	5.9e-29	37	173	2	95
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................ssssasec....e 74 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai+el+++ s +s+ e e XP_026392069.1 37 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAELppwhptatmptpntlnpsS-KSS-EQrqieE 129 79**************************************************************9999887665555444321.111.1112221 PP TCP 75 aesssssasnsssg.................................kaaksaa 95 +++ + + + ++ XP_026392069.1 130 -DEE---------EnqlrsrgnqneqggflgsssktsrqvggveqsgRYMFLQN 173 .111.........11112222222334555555555555555544432222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MGETQNRSST SRLGLLRGSG GGGEIIEVQG GHIVRSTGRK DRHSKVCTAK GPRDRRVRLS 60 AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KSAIDELAEL PPWHPTATMP TPNTLNPSSK 120 SSEQRQIEED EEENQLRSRG NQNEQGGFLG SSSKTSRQVG GVEQSGRYMF LQNQQEQQQH 180 QQNNSFLPPS LDSDSIADTI KSFFPMATSS SSIHFQNYSS PPDLLSRTNS QTQDLRLSLQ 240 SFQDPMFHQH HHSQHQQHHH SNTSSEQQHA LFSTAFDTSG GGGSTNAWSE QQMQEMGRFQ 300 RMIAWNPNTD SSGGNGNGSG SSSGGFMFNS PPQQQQQPQP SSSQQAVQQT LFGNSPNPFF 360 SQRGPLQSSN SPSSIRAWNN TTDPSMVSDD NQHYQNLNSS IHHHQQMQQP FASGGFGFRI 420 PARIQGEEEH DVGASHKPPS SASRH

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MGETQNRSST SRLGLLRGSG GGGEIIEVQG GHIVRSTGRK DRHSKVCTAK GPRDRRVRLS  60
AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KSAIDELAEL PPWHPTATMP TPNTLNPSSK  120
SSEQRQIEED EEENQLRSRG NQNEQGGFLG SSSKTSRQVG GVEQSGRYMF LQNQQEQQQH  180
QQNNSFLPPS LDSDSIADTI KSFFPMATSS SSIHFQNYSS PPDLLSRTNS QTQDLRLSLQ  240
SFQDPMFHQH HHSQHQQHHH SNTSSEQQHA LFSTAFDTSG GGGSTNAWSE QQMQEMGRFQ  300
RMIAWNPNTD SSGGNGNGSG SSSGGFMFNS PPQQQQQPQP SSSQQAVQQT LFGNSPNPFF  360
SQRGPLQSSN SPSSIRAWNN TTDPSMVSDD NQHYQNLNSS IHHHQQMQQP FASGGFGFRI  420
PARIQGEEEH DVGASHKPPS SASRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	6e-88	TCP family protein